Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03436 ATGACTACGGTATCCGGTGTTGTTTCCCGCCAAGTTCTGCCTGCTTGTGGTAACCTTTGTTTCTTCTGCCCTTCCTTGAGGGCAAGGTCTAGACAGCCTGTCAAGAGGTACAAGAAACTCATTGCTGACATTTTTCCTCGTAACCAGGAGGAAGAACCAAATGACAGAAAAATAGGAAAACTTTGTGATTATTCCGCCAGAAATCCTTTACGCATTCCAAAGATTGTGACTGCCCTTGAGCAAAGGTGTTACAAAGAGCTACGAAATGAGAATATTCGCGCAACAAAAATTGTCATGTGTATTTACAAGAAATTTCTGTTTTCTTGTAAAGAACAATTGCCATTGTTTGCTAGTAGCTTACTAAGTATTATCCACACACTGCTGGATCAAACGCGACAGAATGAAATGAGTGTTATTGGATGTAACATTCTTTTTGATTTTGTAAATAGTCAGGTTGATGGAAGTTACCTGTTCAACTTAGAAGGTATTATCCCAAAGCTCTGTCAATTAGCCCAAGAAATGGGGGACGATGAAGAAATTAAAGTTCACCGTTCAGCCGGTTTGAAAGCTCTTTCAGCAATGGTTCGATTTATGGGCCAACATTCTCACATATCAGTTGAGTTTGACAATATTGTTTCGGCTGTCTTGGAAAATTATGAAGTTCCTAAGGAAAATTCAGCTAGTCTTGATCAAGAGGAACAAGGTAGTGAAAATAAGGGTGATCATGACACCACCAATGAGGGTGAAACTGAATTCTCTCTATTGATAGATGTCAAAAAGAGAAATCCATCTTGGAGTAGAGTTGTTAACGACAAAGGCGAAGTAAATTTTACAATTGAAGAAGATAAGAATCCTTCGTTTTGGTCTGGAGTTTGCCTACATAATATGGCCAATTTAGCCAAGGAAGGGACTACTATACGTCGTGTAATGGAATCTATGTTCCGATACTTTGATAATGGCAATTTATGGTCTATAAACCACGGTCTTGCTATTTCTGTGTTAAAGGACATTCTATTTTTGATGGATGATTCTGAGAAAAATACGCATGTATTGTTGTCGATGTTAATTAAGCATCTAGATCATAAATCTGTCCTTAAAGAACCCAACATGCAGCTCGACATTGTTGAGGTTGCAACTTCACTTGCCGAATATGCAAAGGTTCAACCTTCTGTATCGATAATTGGTGCAGTAAGTGACATGATGAGACATTTACGGAAGACCATTCATTGTTGCCTAGATAACTCAAATATGGACAACGATGCAATCAACTGGAATAAGAATTTCAGGCAAGTTGTGGATGCATGCCTTGTTGAGTTAGCGAATAAGGTTGGAGAAGCAGACCCAATTATTGATGTTATGGCTGTGATGTTAGAGAATATCTCAACTATTACAATGGCATCTAGAACCACGGAATTCCCTGAGGCAATGTTTCACCAACTACTCTTGGCTATGGTCCATCCAGATCATGAGACACGAGTCGTAGCTCACCGCATTTTTTCTGTCATTCTTGTGCCAACTGCTTCTGAGCCAAAAGCATCAGGTGTTCCACGAACACTTTCAAGAGCAGTCTCTTTTTTCACTTCTTCAGCTTCCTTATTTGAAAAACTAAAACTGGAGAAACGTTCTGCAAGTGTAAGATTAAGTCAGTATAACAAAGAAAATGTTGCCGGAGAGGTTGAACCAGCTAATAGCAATGTTGGGATCATAAACAGATTGAAGTCAAGCCATAGTCGGGTTTCTAGCGTAAATAATCCTCCTCTAACGAATAAAACAGACGGAATTACTGCAAACGGTGATAATCAGAACTCGAAGGTTGTTGCCCTCAGGCTGAGTAGGCATCAAATAAACCGATTGATGTCATCAATTTGGACACAATCTATATCTCCTGAAAATATGCCTGCAAATTACGAAGCAATTGCTCTTACGTACAGCTTGGTGTTACTTGTTTCTAGAGCTAAGAATTCTTTTCATGAGTACATAGTTCGAAGTTTTCAGCTTGCGTTTTCTTTATGGAATATTTCTCTCAGAGATGGGCCATTGCCACCATCTCGTCGAAGATCACTTTATACTTTGGCAGTTTCAATGATTATGCTTTCTTCAAAAGCATACAACATTGTCACTCTTGTCGATAGTACCAAGGAAGTGCTTACAGAGAGAAAGATTGACCCTTTCCTTCAATTGGTTGAAGACAAGTTGCAAGTTGTCAAATTTGCACCTGAAAATCTAACCATCAACTATGGATCCAAAGAAGATGATGAAAGGGCCTCACACACACTGTTGGAATTATTGGCTTCTGCACACCAAACACATGAATGCTTTGCTTCTGAAATCATTAGAAGCTTGGACATTTATTCAAAAGCTGAATTATTGTCAATAAAGGAAAAACTGTTAGAAGAATTCTCACCAGGCGATACATGTGATCTTGGATCTCAGTTGACCGTCAATATTCCCAGAAAGACTACTTCGACAGTCGATGATGACTTTATTTACGAGTTATTTGAAAGTCAATTAAAACAAAGTCCAAGATTGTCGACAGAGGTCCCTAGTCTTTTGAGTGCTAATCAACTTTTAGAATTAGTTTTCGACCCATCTCATCCTGCTGGGAGGATTTCTGTATCAACTGCATTTGATACGCCTTATGAGGATACGACTGATAACTGTGAGGTACATATGATGGGAAAGGACAAAGTGTCCAGATTGATGAGTACCAATCTGAAGCAAGAATGTTCAGTGAACTCGTCTTTACCAAATGACGACATTGAACCGAAAAACACGGATTCATCTTCCCATGTGGATCCTCCGAAGGCGGAAAATCTTCTCTATGATGATAATTTTGTGGAATTGTACCAACCAACTTCTGGCCCCGTTTCGAATTTGTGTGGAGCAGAATATCAAGATCATCCTCACTTTTTCCAACTGCCAACAGCAAGTCCATTTGATAACTTTCTGAAAGCTGCTGGTTGTTAA 2967 0.3923 MTTVSGVVSRQVLPACGNLCFFCPSLRARSRQPVKRYKKLIADIFPRNQEEEPNDRKIGKLCDYSARNPLRIPKIVTALEQRCYKELRNENIRATKIVMCIYKKFLFSCKEQLPLFASSLLSIIHTLLDQTRQNEMSVIGCNILFDFVNSQVDGSYLFNLEGIIPKLCQLAQEMGDDEEIKVHRSAGLKALSAMVRFMGQHSHISVEFDNIVSAVLENYEVPKENSASLDQEEQGSENKGDHDTTNEGETEFSLLIDVKKRNPSWSRVVNDKGEVNFTIEEDKNPSFWSGVCLHNMANLAKEGTTIRRVMESMFRYFDNGNLWSINHGLAISVLKDILFLMDDSEKNTHVLLSMLIKHLDHKSVLKEPNMQLDIVEVATSLAEYAKVQPSVSIIGAVSDMMRHLRKTIHCCLDNSNMDNDAINWNKNFRQVVDACLVELANKVGEADPIIDVMAVMLENISTITMASRTTEFPEAMFHQLLLAMVHPDHETRVVAHRIFSVILVPTASEPKASGVPRTLSRAVSFFTSSASLFEKLKLEKRSASVRLSQYNKENVAGEVEPANSNVGIINRLKSSHSRVSSVNNPPLTNKTDGITANGDNQNSKVVALRLSRHQINRLMSSIWTQSISPENMPANYEAIALTYSLVLLVSRAKNSFHEYIVRSFQLAFSLWNISLRDGPLPPSRRRSLYTLAVSMIMLSSKAYNIVTLVDSTKEVLTERKIDPFLQLVEDKLQVVKFAPENLTINYGSKEDDERASHTLLELLASAHQTHECFASEIIRSLDIYSKAELLSIKEKLLEEFSPGDTCDLGSQLTVNIPRKTTSTVDDDFIYELFESQLKQSPRLSTEVPSLLSANQLLELVFDPSHPAGRISVSTAFDTPYEDTTDNCEVHMMGKDKVSRLMSTNLKQECSVNSSLPNDDIEPKNTDSSSHVDPPKAENLLYDDNFVELYQPTSGPVSNLCGAEYQDHPHFFQLPTASPFDNFLKAAGC 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03436 988 MobiDBLite consensus disorder prediction 910 935 - -
Trre13g03436 988 SUPERFAMILY ARM repeat 58 504 IPR016024 -
Trre13g03436 988 MobiDBLite consensus disorder prediction 223 247 - -
Trre13g03436 988 Coils Coil 533 553 - -
Trre13g03436 988 PANTHER PUTATIVE, EXPRESSED-RELATED 6 988 - -
Trre13g03436 988 MobiDBLite consensus disorder prediction 578 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03436 Trre-Chr13 42092428 42098404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03436 K21842 - gmx:100817296 1416.36