Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03347 ATGGCGGCATTGAAAGGATTGTTGAAGAAAGGTTTAGGAGAAATGGAGTTCAACGCCGGTGGAGGACTCATCAACTGGTTTCCAGGACACATGGCATCCGCCACACGCGCCATCCGTAACCGTCTTAAACTCGCCGACCTCGTCATCGAAGTCAGAGACGCTCGTATCCCTATTTCCTCCATCAATTCCGATCTTCAATCTCATCTTTCATCTAAACGACGTATCATTGCACTCAACAAAAAAGACTTAGCTAACCCTAACATCATGCATAAATGGGTGAATTATTTTGAGACGTGTAAGCAAGATTGTGTTCCTATAAATGCTCATAGTAAGAGTTCTGTTACGAAGCTTCTGGAACTTGTTGAGTTGAAGTTGAAGGAAGCGATTTTGAAGGAACCTACTTTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGCAAATCTTGTTTGATTAATTCTATTCATCAAATTGCGCAATCTCGTTTTCCTGTGCAGGAGAAGATGAAGCGAGCTGCTGTGGGTCCACTACCCGGTGTTACTCAAGATATTGCAGGATTTAAGATAGCAAACAAACCTAGCATATACGTCTTAGATACCCCAGGAGTTCTTGTTCCAAGTATTTCAGACATAGAGACGGGGTTAAAGCTTGCTCTTGCAGGGTCTGTTAAAGATTCAGTGGTCGGTGAGGAGCGTATTGCTCAATATTTATTGGCAGTTTTAGATACCCGGGGTACTCCACTTCACTGGAAACACCTACTAAATAACAGGAGAATAGATGGGATTGCATATGATGAAGAAAATAATCGATATAACTTGAAAACTCTTAAGCAAAGGAGAAGTCCGCCTAATAGATCTGACTTGGTATACGTGGAGGATATTGTGGTGGGAGTTCAGCATGCACTCTATTCAACTCTAGCAGAATTCAATGGCAATGTAGAAGATGAGGGCGACTTGGAGAACCTGATTGACGAGCAGTTTGGTGCACTGCAGAAGGCATTGAAGATACCTCACAAGGCTTCAGAAGCACGGTTGATGGTATCCAAAAAGTTCCTTACTTTATTCAGAGCTGGTAAACTAGGACCTTTTATTCTTGACGATGTCCCCATCGCCAAATCTGTATAA 1122 0.4251 MAALKGLLKKGLGEMEFNAGGGLINWFPGHMASATRAIRNRLKLADLVIEVRDARIPISSINSDLQSHLSSKRRIIALNKKDLANPNIMHKWVNYFETCKQDCVPINAHSKSSVTKLLELVELKLKEAILKEPTLLVMVVGVPNVGKSCLINSIHQIAQSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLDTRGTPLHWKHLLNNRRIDGIAYDEENNRYNLKTLKQRRSPPNRSDLVYVEDIVVGVQHALYSTLAEFNGNVEDEGDLENLIDEQFGALQKALKIPHKASEARLMVSKKFLTLFRAGKLGPFILDDVPIAKSV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03347 373 Gene3D - 24 203 IPR027417 -
Trre13g03347 373 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 31 205 IPR030378 GO:0005525
Trre13g03347 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 218 IPR027417 -
Trre13g03347 373 Gene3D - 208 358 IPR023179 -
Trre13g03347 373 FunFam Mitochondrial GTPase 1 24 203 - -
Trre13g03347 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 14 370 - -
Trre13g03347 373 Pfam 50S ribosome-binding GTPase 137 250 IPR006073 GO:0005525
Trre13g03347 373 CDD YlqF 26 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03347 Trre-Chr13 41027412 41031354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03347 K19828 - gmx:100801130 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03347 13 41027412 41031354 Trre13g03347 13 41027412 41031354 ECH