Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03343 ATGGTTTATCATCACCGTTACCATCAACTCAGAAAACCAACAGAATACATCAAAGATGAAGAGTCACTAAATCATATCATGGATTGTTCTAGCTCTGTTTATTCTAAAAGAACAAGACCAAAGTTGTTGTCTTTACTTTTCCTCATCACTTTTCTCTCTTGTTGCTATGTTTTTGCACCTTTTTTCCTTGGACCCTCTTTCTCTTTATCCCTTTTATACTCTTATGGACCTGAAAATGATAGCAACCAAGATGGTGTTGATGTAAAAGCTTCTGCATGCTCTTCTGTTTCAACTGGAACTATATGTTGTGATCGAAGTGGTTATCGTTCTGATATATGTGTGATGAAAGGTGATATAAGAACACACTCTTCTTCCTCTTCAATCTTCCTCTACAACTCAATAAGCCACAACAATAATGTTTCAAGGACTATTGAAGAGGATAAAATGATCCAACATGAAAAGATAAAGCCCTATACTAGAAAATGGGAGACAAGTGTAATGGACACCATCGATGAATTGAACCTTGTCGCAAAGAAAGTGAATTCGGGTAATGTACAAGGTTGTGATGTGCAACATGATGTTCCGGCAGTGTTCTTCTCTAACGGAGGCTATACCGGAAATGTTTATCACGAGTTCAATGATGGAATCATACCTTTGTACATCACTTCACAGCGTTTCAACAAGAAGGTTGTATTTGTGATACTTGAATATCATAGTTGGTGGATCACGAAATACGGTGACATCCTTTCTCATCTATCTGACTTTCCACCGATTAATTTTAGCGAAGATAATAGGACTCATTGTTTCTCCGAAGCCATTGTTGGTCTCAAAATCCACGATGAACTAGCCGTGGATTCTTCATTAATGCAAGGTAACAAAAGCATTGTTGATTTTAGAAACCTTTTGGACAAAGCTTATTCGCCTCGGATTAAAGGACTAATCAAAGACGAGGAAAGGGAAGCTGAAGAGAAGTTGCGACAACAACGACAAATCTCCTTATCTCCATCACCAGAACCAGAATCAAAAACCTCACAAGGATTACAAGAAATTGCACGGACGAAACCAAAATTGGTTATTGTCTCTAGAAGCGGTTCAAGAGCTATAACTAACGAGAATTTGCTAGTGAGAATGGCAGAGGAAATTGGTTTCAAGGTAAAAGTTTTAAAACCTCAAAAAACATCAGAATTGGCAAAGATTTATAGAGTACTAAATGAAAGTGATGTGATGATTGGTGTTCATGGAGCTGCAATGACACATTTCATGTTCATGAAACCTCGTTCCGTGTTCATTCAAGTTGTTCCTCTTGGTACAAATTGGGCTGCAGATACTTATTATGGCGAACCTGCAAGGAAACTTGGTTTGAAATACATCGGATATGAAATTCATCCGAAAGAAAGCTCTTTATACGGTAAATATGATAAAAATGATCCTATTTTGAAAGACCCTGAAAGCATTAATGAGAAGGGATGGGAATATACAAAGAAGATTTATCTTGATAGCCAAAATGTTAAATTGGACCTTAGAAGATTCAGAAAAAGGTTGCATAGAGCTTATGAGTACACAATTCTCAGATCAAATTTGAACCTTCAACACCAACCACAGTGGAATTTTTGA 1614 0.3705 MVYHHRYHQLRKPTEYIKDEESLNHIMDCSSSVYSKRTRPKLLSLLFLITFLSCCYVFAPFFLGPSFSLSLLYSYGPENDSNQDGVDVKASACSSVSTGTICCDRSGYRSDICVMKGDIRTHSSSSSIFLYNSISHNNNVSRTIEEDKMIQHEKIKPYTRKWETSVMDTIDELNLVAKKVNSGNVQGCDVQHDVPAVFFSNGGYTGNVYHEFNDGIIPLYITSQRFNKKVVFVILEYHSWWITKYGDILSHLSDFPPINFSEDNRTHCFSEAIVGLKIHDELAVDSSLMQGNKSIVDFRNLLDKAYSPRIKGLIKDEEREAEEKLRQQRQISLSPSPEPESKTSQGLQEIARTKPKLVIVSRSGSRAITNENLLVRMAEEIGFKVKVLKPQKTSELAKIYRVLNESDVMIGVHGAAMTHFMFMKPRSVFIQVVPLGTNWAADTYYGEPARKLGLKYIGYEIHPKESSLYGKYDKNDPILKDPESINEKGWEYTKKIYLDSQNVKLDLRRFRKRLHRAYEYTILRSNLNLQHQPQWNF 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03343 537 MobiDBLite consensus disorder prediction 328 347 - -
Trre13g03343 537 Pfam Glycosyltransferase 61 276 428 IPR007657 GO:0016757
Trre13g03343 537 PANTHER GLYCOSYLTRANSFERASE 41 521 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03343 Trre-Chr13 41001661 41003825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03343 - - gmx:100800591 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03343 13 41001661 41003825 Trre13g03343 13 41001661 41003825 ECH