Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03342 ATGGATTCTGTACTCGGTAATTTACCCTCTTATAACCCCAACAATTTCACTCAGATTCGTCCTTCCGATCCTTCTACCTCTTCTAAACCGACACCACCTACTTACCATCCTACTCACAACAGAACCCTTCCACCACCTGATCAAGTGATAAACACAGAAGCTAAAAATATCCTCCTAAGGCACATTTATCAGCACGCTCGAGAAAAGTTGAAACCAAAAAGAGCTGCAGCCGGTAACCTTTTACCGGAGCATGGATGCAAGCAACCTAGGGTTTCTACTTGA 282 0.4397 MDSVLGNLPSYNPNNFTQIRPSDPSTSSKPTPPTYHPTHNRTLPPPDQVINTEAKNILLRHIYQHAREKLKPKRAAAGNLLPEHGCKQPRVST 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03342 93 MobiDBLite consensus disorder prediction 69 93 - -
Trre13g03342 93 MobiDBLite consensus disorder prediction 1 50 - -
Trre13g03342 93 Pfam Det1 complexing ubiquitin ligase 4 67 IPR018276 -
Trre13g03342 93 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 91 IPR033575 GO:0032434
Trre13g03342 93 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03342 Trre-Chr13 40942458 40944353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03342 K11792 - gmx:100784555 142.895