Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03310 ATGATCACTAACTTGTTCTCTTTGGTTTTCTTAGTGCTCATTCTTTGTTCCTCTTCCTTTCTTGTATCAGCCTCTGATTCTGATCATGGTGAGGATGAATACAACTACAAAAGTGGAGATAGTAAAGGACCAGAAAATTGGGGCAATATAAAACAAGAATGGAAACTTTGTGGGACTGGAAAATCACAATCTCCAATTGATATCATAAATAGTACGGTGCATGATCTCCTTCAACTTGGTAAACTTGAAAAAGATTACAAACCTGCCCCTGCTGTACTAAAGAATAGGGGTCATGATGTCATGCTTGAATGGAATGGTGATGCAGGGAAGTTTGATATAAAGGGAGTGTCCTACAAACTAATACAATGTCATTGGCATACACCTGCAGAGCACACCTTGAATGGAACAAAGTTTGATATGGAACTACATGCAGTTCATCAAAACTCTAAAGGAGAGATAGCTGTGATTGGAATGTGGTATAAAATTGGAGGTCCAGATTCCTTGCTTTCAAAGTTGCTTGACAACATAAAGTCAATTAGTGACAAGGACAAAGATGTAGGAATGATTAACCCAGAAGAAATTAAGTTTGGAGGCAAAAAGTATTACAGATATGTTGGTTCTCTTACAACTCCACCATGTACTGAAGGTGTTATTTGGACAATGCTGAAAAAGGTGAGGTCGGTCTCAAGTGAACAACTAAAAGCTTTGAAAGAAGCTGTTCATCCTGGATTTGAGGAAAATGCAAGGCCAACTCAGGATATTGGTGAAAGAGAAGTTTTGTTATATAATCCCAAAAAAGGAACACTTCAAGAACAAGAATAA 822 0.3759 MITNLFSLVFLVLILCSSSFLVSASDSDHGEDEYNYKSGDSKGPENWGNIKQEWKLCGTGKSQSPIDIINSTVHDLLQLGKLEKDYKPAPAVLKNRGHDVMLEWNGDAGKFDIKGVSYKLIQCHWHTPAEHTLNGTKFDMELHAVHQNSKGEIAVIGMWYKIGGPDSLLSKLLDNIKSISDKDKDVGMINPEEIKFGGKKYYRYVGSLTTPPCTEGVIWTMLKKVRSVSSEQLKALKEAVHPGFEENARPTQDIGEREVLLYNPKKGTLQEQE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03310 273 SUPERFAMILY Carbonic anhydrase 33 260 IPR036398 -
Trre13g03310 273 SMART Carb_anhydrase_2a 36 263 IPR001148 -
Trre13g03310 273 CDD alpha_CA_prokaryotic_like 43 261 IPR041891 -
Trre13g03310 273 ProSiteProfiles Alpha-carbonic anhydrases profile. 32 263 IPR001148 -
Trre13g03310 273 Pfam Eukaryotic-type carbonic anhydrase 43 260 IPR001148 -
Trre13g03310 273 PANTHER CARBONIC ANHYDRASE 32 257 IPR023561 GO:0004089|GO:0008270
Trre13g03310 273 Gene3D Alpha carbonic anhydrase 30 270 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03310 Trre-Chr13 40536568 40539660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03310 K01674 - gmx:100781864 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03310 13 40536568 40539660 Trre13g03310 13 40536568 40539660 ECH