Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03272 ATGTCCATCTTGTTCTCTACAATTCTACTTCCTTCCACTAAACTACCCATCTTCAACAACCCACAACGTCACGCATTTCCATCTCTTCGCCATTTCACAGATACTACTAAACGCTTTCATAAAGCTTCGTCTTTTATTGCTTTTGCGCTCAACGGTAACCCCACTCAGAGAAGAAATACTAGAAACCCTGTTTTGAGTGAAGGTAGAGATGAAGATGAAGCTCTTGGTCCCATTTGCCCTGGTTGTGGAATTTTCATGCAAGATAAAGATCAAAACCTTCCTGGGTTTTACCAACAAAGAGAGCTCAAACTTGAAGAAGATGATTATGTCTTTGATGAAGATGAAGAAGAAGAAGAAGAAGACGACGATGATGATGATGTAGGTGAAGAAGTTAAAGGGTCAATTGATGAATTTGATGAGTTAGAAGCTATGTTACTTGGTGAAGAAAATGATGATGATGATGAGCTTGATTTAGATGGGTTTAAACATGCTGGAGTTGGGTATGGTAATGTTACTGAAGAGGTTTTGGAGAGAGCAAAGAAGAAGAAAGTTTCAAAAGCTGAGAAGAAGAGAATGGCTAGAGAAGCTGAAAAGGTGAAAGAAGAGGTTACTGTTTGTGCTAGATGTCATTCCTTGAGAAATTATGGGCAGGTGAAGAATAACACAGCTGAGAATTTGATACCTGATTTTGATTTCGATAGGTTGATTTCGACTAGGTTGATGAATCCTGCTGGTAGTGGTAGTTCTACTGTTGTTGTTATGGTTGTTGATTGTGTTGATTTTGATGGTTCTTTCCCGAGAACGGCTGTGAAATCGTTGTTTAAGGCGTTGGAAGGTATTCAGGAGAATACGAAGAAGGGTAAGAGATTGCCAAAGCTTGTTCTTGTCGCTACTAAGGTTGATCTCCTTCCTTCGCAGGTTTCTCCTACGAGGTTGGATAGATGGGTTCGACACCGTGCAAGTGCTGGAGGAGCGCCTAAGTTAAGTGCGGTTTATTTGGTCAGTTCTCGAAAGGATTTGGGAGTGAAGAATCTGTTGTCATATGTAAAGACTTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGTGCTCAAAATGCTGGGAAGTCGACTCTAATCAATGCATTTGCGAAGAAAGAAGGAGCTAAAGTTACAAAGCTCACAGAAGCTCCGGTTCCTGGGACGACGCTTGGGATATTGAGAATTGGAGGAATTTTGTCGGCTAAAGCTAAGATGTTTGATACTCCAGGGCTCTTGCATCCGTACTTAATGTCGATGAGATTGAACCGGGAGGAACAAAAGATGATTGAGATACGGAAGGAACTTCGACCTCGGTCATATAGAATTAAGGCAAGACAAGCTATACATGTTGGTGGCTTGGCGAGACTTGACCTCATTGAAGCCTCTGTTCAAACAATGTATGTCACAGTTTGGGCATCACCAAATATTTCTCTACACATGGGAAAAATTGAAAACGCTAATGAGATTTGGAATAATCATGTTGGTGTCAGGCTGCAGCCTCCGATCGGTAATGACCGCGGAGCAGAACTAGGTACATGGAAAGAAAGGGAAGTAAAAGTATCTGGATCAAGTTGGGATGTCAACTGCATGGACATATCAATAGCTGGTTTCGGTTGGTTCTCTTTAGGTCTTCAAGGTGAAGCAACCATGAAATTATGGACCTATGACGGAGTTGAAATAACTTTGAGAGAACCGTTGGTACTTGACCGGGCCCCATCTCCCGAGAAACCCGGTTTTTGGTTACCAAAAGCCATATCCGAAGCTATTGGCAACCAAACTAAACTTGAAGCTCAAAGAAGGAAAAAACTTGAAGATGAAGATACAGAATTGGTAGGAGCAGGGTCAGAGATATCTGCATGA 1881 0.4205 MSILFSTILLPSTKLPIFNNPQRHAFPSLRHFTDTTKRFHKASSFIAFALNGNPTQRRNTRNPVLSEGRDEDEALGPICPGCGIFMQDKDQNLPGFYQQRELKLEEDDYVFDEDEEEEEEDDDDDDVGEEVKGSIDEFDELEAMLLGEENDDDDELDLDGFKHAGVGYGNVTEEVLERAKKKKVSKAEKKRMAREAEKVKEEVTVCARCHSLRNYGQVKNNTAENLIPDFDFDRLISTRLMNPAGSGSSTVVVMVVDCVDFDGSFPRTAVKSLFKALEGIQENTKKGKRLPKLVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVKNLLSYVKTLAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAPVPGTTLGILRIGGILSAKAKMFDTPGLLHPYLMSMRLNREEQKMIEIRKELRPRSYRIKARQAIHVGGLARLDLIEASVQTMYVTVWASPNISLHMGKIENANEIWNNHVGVRLQPPIGNDRGAELGTWKEREVKVSGSSWDVNCMDISIAGFGWFSLGLQGEATMKLWTYDGVEITLREPLVLDRAPSPEKPGFWLPKAISEAIGNQTKLEAQRRKKLEDEDTELVGAGSEISA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03272 626 MobiDBLite consensus disorder prediction 603 626 - -
Trre13g03272 626 Pfam 50S ribosome-binding GTPase 359 434 IPR006073 GO:0005525
Trre13g03272 626 Coils Coil 182 202 - -
Trre13g03272 626 Gene3D - 245 421 IPR027417 -
Trre13g03272 626 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 238 421 IPR030378 GO:0005525
Trre13g03272 626 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 53 615 - -
Trre13g03272 626 CDD YqeH 206 418 - -
Trre13g03272 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 468 IPR027417 -
Trre13g03272 626 MobiDBLite consensus disorder prediction 107 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03272 Trre-Chr13 40065336 40069441 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03272 - - gmx:100805561 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03272 13 40065336 40069441 Trre13g03272 13 40065336 40069441 ECH