Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03237 ATGGTTCCGATTGAAAATGGTGCCATCGGACCAGAAAGTTTCGCTTTCGATCCTCACGGTGAAGGACCTTACACCGGTGTTTCCGACGGTCGAATTATCAAATGGAATCGCCGTGAGAGTCGTTGGGTTGACTTTGCCGTCACTTTTTCACACAGAGGTGATGGTAATGATGAGGAGTGTGGAGGCCCATATAAGGAGCATCCCAAGAAAGAGCACATATGCGGGCGCCCACTTGGGCTTTGCTTCAACATAGTATCGGGCCAACTTTATGTTGCTGATGCATACATGGGCCTAGTTGTTATTGAGCCCAATGGTGGCAATGCTAGAAAAATCATATCACATGTAGTTGAAGATGAACCCTTGGCATTTACAAACAGTTTGGATATTGATCAACGAACTGGAACAGTCTACTTTACCAGCAGCAGTTCTAAATACCACAGAAGGAACATGTTGAATACCTGCATGTCTTTGGCATTCTTGGCAGCTTTTAGCAAATTCTATACAATCCTTAAGCATTGA 519 0.4451 MVPIENGAIGPESFAFDPHGEGPYTGVSDGRIIKWNRRESRWVDFAVTFSHRGDGNDEECGGPYKEHPKKEHICGRPLGLCFNIVSGQLYVADAYMGLVVIEPNGGNARKIISHVVEDEPLAFTNSLDIDQRTGTVYFTSSSSKYHRRNMLNTCMSLAFLAAFSKFYTILKH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03237 172 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 152 - -
Trre13g03237 172 SUPERFAMILY Calcium-dependent phosphotriesterase 5 143 - -
Trre13g03237 172 Pfam Strictosidine synthase-like, N-terminal 4 35 - -
Trre13g03237 172 Pfam Strictosidine synthase 125 154 IPR018119 GO:0009058|GO:0016844
Trre13g03237 172 Gene3D - 1 159 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03237 Trre-Chr13 39242359 39248593 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03237 - - mtr:11416127 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03237 13 39242359 39248593 Trre13g03237 13 39242359 39248593 ECH