Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03232 ATGAACTCCAAACTAATTCTTGCTGCAACTTTTCTTGCACTCTTCGCCATCATCTACTCCTTATTCGACCCACAGTACCTTTTTACACCTGTTCACATTCCTGGATCCAAGGACAACCTCCATACTGCTACTTTACTCCATGTCACCGGTGCCGTTGGACCGGAAAGTCTTGTTTTCGATAGTCACGGTGAAGGTCCGTACACCGGCGTTGCTGATGGTCGGATTCTTAAATGGGAAGGAGAGGAACGTGGTTGGACTCAATTTGCTGTCACAAGTTCCAATAGGTCGGACTGTGTTCGTCCATTCGCACCAGAGTTGGAGCATATTTGTGGGAGACCACTAGGTCTGAAGTTTGATAAGAAAAACGGTGACCTGTACATTGCTGATGCCTACCTTGGCCTCAAAGTAGTAGGACCTGCAGGTGGTTTGGCCACCCAGGTAGCAACAGAAGCTGAAGGACAGCCCTTTTACTTCACCAATGACATGGACATCAGTGAAGACGAAGACGTGATTTACTTTACTGATTCAAGCACAGTCTACCGTAGAAGGCAATTTATGCTCGTACTTCTTAGCGGAGACAAGACAGGGCGGTTAATGAAATATGATAAGTCGACAAAAGAAGTGAAGGTCTTATTAAGTGGCCTTGCTTTTCCCAATGGTGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTGGTAGCTGAAACCTCGACTCGCAGGATTTTGAGGCTTTGGCTTCATGGACCTAATGCTGGCCAAGTTGATACTTTTGCCGTTCTTCAAGGTTATCCAGACAATGTAAGGAGAAATTCAGAAGGACAGTTTTGGGTTGCTTTGCATGCTAAAGACACTCCTTTTGCAAAGTGGACTTCTTCAAATAAATGGGCTGCTAAAGCATTGTTAAAGCTTGGAAACTTCAAGCAGTTGCATAAGTCGTTGGCGCAGAAACCTCATGGTGTAGCTATAAAGCTGAGTGATGAAGGGAAAATATTGGAAGTCTTGGAAGATTGTGAAGGAAGGACCTTGAAGTTCATTAGTGAAGTGGAAGAGAAAGATGGAAAACTTTGGATGGCATCAGTGTTAATGCCTTACATCGGTGTTTATAATTTATGA 1110 0.4396 MNSKLILAATFLALFAIIYSLFDPQYLFTPVHIPGSKDNLHTATLLHVTGAVGPESLVFDSHGEGPYTGVADGRILKWEGEERGWTQFAVTSSNRSDCVRPFAPELEHICGRPLGLKFDKKNGDLYIADAYLGLKVVGPAGGLATQVATEAEGQPFYFTNDMDISEDEDVIYFTDSSTVYRRRQFMLVLLSGDKTGRLMKYDKSTKEVKVLLSGLAFPNGVALSKDGSFLLVAETSTRRILRLWLHGPNAGQVDTFAVLQGYPDNVRRNSEGQFWVALHAKDTPFAKWTSSNKWAAKALLKLGNFKQLHKSLAQKPHGVAIKLSDEGKILEVLEDCEGRTLKFISEVEEKDGKLWMASVLMPYIGVYNL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03232 369 PANTHER STRICTOSIDINE SYNTHASE-RELATED 13 362 - -
Trre13g03232 369 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 369 - -
Trre13g03232 369 SUPERFAMILY Calcium-dependent phosphotriesterase 35 368 - -
Trre13g03232 369 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Trre13g03232 369 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Trre13g03232 369 Gene3D - 36 369 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03232 Trre-Chr13 39194410 39197405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03232 - - lang:109348186 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03232 13 39194410 39197405 Trre13g03232 13 39194410 39197405 ECH