Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03223 ATGGGTTGTTCAGCTTCAAAAACAACAACAATTGTTGCTAACAAACATCATGAGGATTCAACAACACCTTCTAATTCTCTTCAATCTTCTTCATCATCAACTTCTTCTTTTTCTCCTTCTTATGCTTCACATTACTTCAATTCTTCTTCTTCACCACCAATTAGAAAAGCTTTATCACTAACAATGCCTTTAATCCATCACCCTCCAACCAAAAAAGGTGACACTCATCATCTTGTTTCACTCACTTCAACTACCTATGGTTCTCTTCTATTAATTGACCAAAAAGTCCCTAACTTTACTTCTCATGAAGAAGAAACCCATCTCAAAAATACCTCTCAAAATGAAGAACAATCATTGTCTCCTGATTCTGTCATCAATACTTGGGAACTCATGGATGGTTTAGATGAACATGAACATGAAGATTCTCATCATAAAGCTTCAATTTTTAACAACCCAATGAGTTTCTCAGACAAACATAGTTCATGCAGGTACACAACCTTTGATGGGTCTGCAAAAAAGAATCTTCTTGATTCTTTTGAATCATTGAAAGCTTCAGAAGCAATAATGGAAGAAAAAACTTGTTCTTCCAAAAAACTTGTGAAGAAACCTCTATGGCAACATTTATCAGAAGAAGCTTTACTTGCTAAGTTGGATCCAAGTGTTGCTTGGAGTTATAGAAGAGCATTGTCATCAAGAAACCTAGGTGGTTTCAGCAACAACAAAAACAATATGTTCAGAGATGTAAGATCAATGGAATCAAGTCCTATGAATCCTTGTTCTTCTTTGTTTGGTAGTAAAAGTTTGTGTCTTTTACCTGGTACTGAAAACAGAATAGTGGTTTATTGCACAAGTTTGAGAGGGATTAGAAAAACTTATGAAGATTGTTGTTCAGTGAGGATGATTTTGAGAGGATTTAGAGTTGCAGTTGATGAGAGAGATATTTCTATGGATTCATCTTATAGGAAGGAATTGCAGAATGCACTTGGTAGCAAATCAGTAGTGACATTGCCACAGGTTTTTATTAGAGGGAAGCATGTTGGAAATGCAGATGATTTGAAACAATTGAATGAGTCTGGTGAATTGGCTAAAATGTTACAAGGTTTTCCAACTCAAGATCCTTGGTTTGTTTGTGACAAATGTGGTGATGCAAGGTTTGTGCCTTGTTTTAATTGCAATGGTAGCAGAAAAGTGTTTGAGGAAGAACAAGGAAAATTGAAAAGGTGTGTTCATTGTAATGAGAATGGTTTGATAAGATGCACAAGTTGCTGTTCATGA 1275 0.3545 MGCSASKTTTIVANKHHEDSTTPSNSLQSSSSSTSSFSPSYASHYFNSSSSPPIRKALSLTMPLIHHPPTKKGDTHHLVSLTSTTYGSLLLIDQKVPNFTSHEEETHLKNTSQNEEQSLSPDSVINTWELMDGLDEHEHEDSHHKASIFNNPMSFSDKHSSCRYTTFDGSAKKNLLDSFESLKASEAIMEEKTCSSKKLVKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRNLGGFSNNKNNMFRDVRSMESSPMNPCSSLFGSKSLCLLPGTENRIVVYCTSLRGIRKTYEDCCSVRMILRGFRVAVDERDISMDSSYRKELQNALGSKSVVTLPQVFIRGKHVGNADDLKQLNESGELAKMLQGFPTQDPWFVCDKCGDARFVPCFNCNGSRKVFEEEQGKLKRCVHCNENGLIRCTSCCS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03223 424 CDD GRX_GRX_like 277 419 - -
Trre13g03223 424 Pfam Glutaredoxin 279 346 IPR002109 -
Trre13g03223 424 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 75 423 - -
Trre13g03223 424 Gene3D Glutaredoxin 276 369 - -
Trre13g03223 424 MobiDBLite consensus disorder prediction 1 34 - -
Trre13g03223 424 ProSiteProfiles Glutaredoxin domain profile. 266 372 - -
Trre13g03223 424 SUPERFAMILY Thioredoxin-like 274 366 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03223 Trre-Chr13 39080580 39081854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03223 K17479 - gmx:100811817 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03223 13 39080580 39081854 Trre13g03223 13 39080580 39081854 ECH