Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03174 ATGGACACCATTAGCACAAGTAGCACCAATTCAATCATTAGTTCTCTTCAACAAAGGACACCAACAAAAATATCCAAATCCAAGAAGAACAAGAACAAACCCATCAAGGTAGTGTATATATCTAACCCTATGAAGGTTAAGACCAGTGCCTCTGAATTTAGGGCACTGGTCCAAGAACTCACCGGTCAGTATGCTGAATCGCCGCCGAATCCTTCTAGGTTTCAGGATTTCAGCGGCGATGATAGCAGCGCTGACGGTGGATGCAGTGAGAATAGAATCGATTGTGATAAAAATGATCGTACGGTTGTGGTTGTGCCTTCACTTGTGGATCCTGATGATGATGATGATAAAGTGAAACCTAGTGAGAGTTTTGAGGGTTTTGATGAAGATGTACTTTTGAATATGCCTCAGATGGTGGAGAACATTTGGGATCTGCTTCCAACAAGTGCATTCTATGAATCTTTTCAACTTGATAGCTATTGA 483 0.4161 MDTISTSSTNSIISSLQQRTPTKISKSKKNKNKPIKVVYISNPMKVKTSASEFRALVQELTGQYAESPPNPSRFQDFSGDDSSADGGCSENRIDCDKNDRTVVVVPSLVDPDDDDDKVKPSESFEGFDEDVLLNMPQMVENIWDLLPTSAFYESFQLDSY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03174 160 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 17 159 IPR039335 GO:0051091
Trre13g03174 160 MobiDBLite consensus disorder prediction 1 23 - -
Trre13g03174 160 MobiDBLite consensus disorder prediction 63 92 - -
Trre13g03174 160 MobiDBLite consensus disorder prediction 63 85 - -
Trre13g03174 160 MobiDBLite consensus disorder prediction 1 30 - -
Trre13g03174 160 Pfam VQ motif 40 65 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03174 Trre-Chr13 38306283 38306765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03174 - - mtr:11413308 192.971