Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03166 ATGGCAATCCTTAAAATAAGCAAAAAACATCACAAACGTTTCAACAACCCTTTCCCTTCTGCACCAACCTCCCTTCCTAATGTCCAAGGTTCTTTATTCATCAATTCCAAAGCTTTATCTTCACAAGATCAAACCTTTTCAATTGGCAATGATTTTCAGCTTTTTTGGTCCAATATCAATGGTGGGCACCTTTCAATTTCACACATTTCTCAGAAAACAAGACCCATTTGGTCCACAATCTCAGGAAAAGCTTTTGTTTCAGCTGCAGTTGTTGACACAGAGATTGAAGAAAGTAGAGGTTCTTTTCTTGTTAAAGATAAAGATGTTCATGTGATTTGTAATCATCAAACTATTGATGATATTAGGATTATTGATCAAGTTGAAGATTCAGTATTGGATTTGGATCAGAAAAGTTGTTATGCAGAAGAGATGAAGTTACCTACTTTGTTGATCACAGGAAAGCTTTTCAATATGAGTAAGAAGAGTAAAAGGTTTCAAAAATATGGAATTCAAGGAAATATACAGTTTGAATCAAAAGGGCCATTTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAAACAAGCATGAGATTGGTTTTCAAGTGAAGATTGAGAAACTCAACTTTAGTTCAAGTAATAAGGTGTCTTCAGAAGGTTCTGGAATTTACAATGGTTTCAAGAAGAGGCTAAGTAGTAGAAAAAAGAGGTTAGGTTGGTGTTGGTATCTTTCAAGGCCAAGAGGGTTTGTTTTGGTTTCTTCAGTTGAGGATGAAATGGGAGAAATGAAAATACCAAAACCAAAAGAATTCAATAGGGTTTGGTTGACATATGCTAGTGATGAGAATGAGAGGTTTTACGGTTTTGGCGAGCAGTTTTCTCACATGAATTTCAAGGGCAAAAGGGTGCCTATCTTAGTTCAAGAACAAGGTATTGGAAGAGGAGATCAACCTATAACTTTAGCTGCTAACTTGGTCAGTTACAGGGCAGGAGGTGATTGGAGTACAACATATGCTCCTTCACCATTTTACATGACATCAAAAATGAGGTCTCTTTACCTTGAAGGATATGATTATACCGTCTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATATATGGAAACTCGGTTGAAGGACGGATATTGCATGGGAACACACCTTGTGAGCTGATTGAACATTTCACAGAAACCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCTGGTGCTATAGTTGGAATGCAGGGTGGCACCGATGCTGTACGTCGTATTTGGGATGAATTAATAACTTATGATGTTCCTGTCTCGGCATTTTGGTTACAGGATTGGGTAGGGCAGAGAGAAACAATGATTGGCTCACAACTTTGGTGGAATTGGGAAGTGGATGACCAAAGATATTGGGGTTGGAAGGAACTTATCAACGATCTTAGAACTCGAAATATAAAAGTTATGACCTATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGCATAACAAAAAGAGAAACCTTTTTGAGGAGGCAAAACAGTTGGACATATTGGTGAAAGACAGTAATGGCAATCCGTACATGGTTCCAAATACTGCCTTTGATGTGGGAATGCTAGATCTAACTCACCCAAAAACTTTCACTTGGTTCAAGCATATTCTACTTGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGCGAAGGCCTTCCCGTTGACGCCGTTCTATATTCAGGTGAAGATCCTATTTTAGCTCATAACAGATATCCAGAACTATGGGCCAAAATCAACAGAGAAATTGTGGAAGAATGGAAAACTAAGTCCTTGGACAAGTTGAAGGAAGACCAAGAAGATGGATTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGTCCTAAATGGGGGATGCTATTTTGGGAAGGAGATCAAATGGTCAGTTGGCAAGCTAATGATGGAATAAAGAGTTCTGTTGTTGGCTTACTTAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATCGGAGGTTATTGTACAGTTAACTTACCAATAGTTAAATACAGAAGAAGTCAAGAATTGCTTTTGCGTTGGATGGAGCTTAATTCGTTCACCACGGTCTTCCGCACCCACGAAGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAATGAACAAACACTGTCACACTTTGCGCGCTCCGCAAAAATATACACAGCATGGAAATTTTATCGAATTCAACTAGTGAAGGAAGCAGCACAGAAAGGATTGCCTGTTTGCCGGCACCTATTTCTCCATTACCCTAATGAAGAACATGTGCATAACTTTAGTTATCAACAATTCTTGGTTGGTTCTGAGTTTCTAGTGGTTCCAGTTCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGTAGTTGGCTACATATTTGGACAGGAAAAATATTTTCCAAACAAGGAAGTGAGTCATGGATAGAAGCTCCAATGGGTTATCCTTGTGTGTTTATTAAGGTTGGTTCCATTATTGGAGAAACCTTTTTGAGTAACCTAAAAAATTTAGGTATTCTTTAA 2598 0.3861 MAILKISKKHHKRFNNPFPSAPTSLPNVQGSLFINSKALSSQDQTFSIGNDFQLFWSNINGGHLSISHISQKTRPIWSTISGKAFVSAAVVDTEIEESRGSFLVKDKDVHVICNHQTIDDIRIIDQVEDSVLDLDQKSCYAEEMKLPTLLITGKLFNMSKKSKRFQKYGIQGNIQFESKGPFVYARYWVLFNQKNKHEIGFQVKIEKLNFSSSNKVSSEGSGIYNGFKKRLSSRKKRLGWCWYLSRPRGFVLVSSVEDEMGEMKIPKPKEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPILVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYMTSKMRSLYLEGYDYTVFDLTRLDRVQIQIYGNSVEGRILHGNTPCELIEHFTETIGRLPELPEWIISGAIVGMQGGTDAVRRIWDELITYDVPVSAFWLQDWVGQRETMIGSQLWWNWEVDDQRYWGWKELINDLRTRNIKVMTYCNPCLAPVDEKHNKKRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTFTWFKHILLEMVDDGVRGWMADFGEGLPVDAVLYSGEDPILAHNRYPELWAKINREIVEEWKTKSLDKLKEDQEDGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSQELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNEQTLSHFARSAKIYTAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNEEHVHNFSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKIFSKQGSESWIEAPMGYPCVFIKVGSIIGETFLSNLKNLGIL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03166 865 SUPERFAMILY Glycosyl hydrolase domain 762 846 - -
Trre13g03166 865 SUPERFAMILY Galactose mutarotase-like 240 389 IPR011013 GO:0003824|GO:0005975|GO:0030246
Trre13g03166 865 Gene3D glycosyl hydrolase (family 31) 216 385 - -
Trre13g03166 865 CDD GH31_N 271 401 - -
Trre13g03166 865 Gene3D Glycosidases 388 793 - -
Trre13g03166 865 CDD GH31_glucosidase_YihQ 401 739 IPR044112 -
Trre13g03166 865 PANTHER SULFOQUINOVOSIDASE 1 864 - -
Trre13g03166 865 Pfam Glycosyl hydrolases family 31 384 851 IPR000322 GO:0004553|GO:0005975
Trre13g03166 865 SUPERFAMILY (Trans)glycosidases 392 760 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03166 Trre-Chr13 38140604 38144931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03166 338 851 Glycoside Hydrolase AT1G68560 23.288 1.35e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03166 - - gmx:100779005 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03166 13 38140604 38144931 Trre13g03166 13 38140604 38144931 ECH