Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03162 ATGGCAAGAAAGAAGACCTTAGTTGCTTCAAAGAAAAGAAAGAGGCGAAAAACACAACTCTTGGATTTGCCCAATCAAACTATTGATTGCATTCTCGAGCGCCTTTCACCAGAAGAATTATGCAGGGTATCAGAAACGTGTACTTATTTGAAAAATCAGTGTAGCAGCGATTATCTGTGGAAGAAACATGTCCAACAGAAATGGAGTAACCTGATTGGTGATGTTGTTCACCAGGTGTGGCAATGGCATAGAACAAAGATAAAATATGCAACAAGTTTCTCCTTACATAAGGATGTAATGGACACATGTGCCACTTTTCGAGGAACTTGGCCATTTGTTGGAATTCAATCATATTTGGAAAATCATTGGCCATACATTAATTTGGTTAAAAATTATTCACAGAAGGCTTTGTATACCTGTATTGAGACAGGTTGCTTCTGGTTTCCTGCTCAACTTTATAGGAATCCAATGTATATGATTTCTTATTGTGATGCCATGTTATGCTACGACTCTCGCACATATTCTTTTCAAGCAAGGTCTCCACTTGGTGATTGGAAAATAACTGAAACAAGGGTTAAGTGGCATGTAGTGAGATTATCAGCACCTAATACCTTTGTAAGGGGTTATTATAAGTCCATATGTCTCAGTTACTTGGAACCTGGAGATTATATTGAGATACAAACCAGACCAAATGTTTTAAGTCCTTATGATTGGTCGTTTGCTGAAGTTGGCCATTTGGAATCATGCGACAAGGATGCGCATAATTGTACTTGCAAACATAGTGGTGAGATTCATTGA 798 0.3797 MARKKTLVASKKRKRRKTQLLDLPNQTIDCILERLSPEELCRVSETCTYLKNQCSSDYLWKKHVQQKWSNLIGDVVHQVWQWHRTKIKYATSFSLHKDVMDTCATFRGTWPFVGIQSYLENHWPYINLVKNYSQKALYTCIETGCFWFPAQLYRNPMYMISYCDAMLCYDSRTYSFQARSPLGDWKITETRVKWHVVRLSAPNTFVRGYYKSICLSYLEPGDYIEIQTRPNVLSPYDWSFAEVGHLESCDKDAHNCTCKHSGEIH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03162 265 PANTHER ESTS AU081301(E20138) 11 263 - -
Trre13g03162 265 SMART fbox_2 23 63 IPR001810 GO:0005515
Trre13g03162 265 Gene3D - 5 100 - -
Trre13g03162 265 SUPERFAMILY F-box domain 18 69 IPR036047 GO:0005515
Trre13g03162 265 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Trre13g03162 265 Pfam F-box domain 20 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03162 Trre-Chr13 38097888 38099755 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03162 - - gmx:100795992 228.024