Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03161 ATGGCAAGAAAGAAGACCTTAGTTGCTTCAAAGAAAAGAAAGAGGCGAAAAACACAACTCTTGGATTTGCCCAATCAAACTATTGATTGCATTCTCGAGCGCCTTTCACCAGAAGAATTATGCAGGGTATCAGAAACGTGTACTTATTTGAAAAATCAGTGTAGCAGCGATTATCTGTGGAAGAAACATGTCCAACAGAAATGGAGTAACCTGATTGGTGATGTTGTTCACCAGGTGTGGCAATGGCATAGAACAAAGATAAAATATGCAACAAGTTTCTCCTTACATAAGGATGTAATGGACACATGTGCCACTTTTCGAGGAACTTGGCCATTTGTTGGAATTCAATCATATTTGGAAAATCATTGGCCATACATTAATTTGGTTAAAAATTATTCACAGAAGGCTTTGTATACCTGTATTGAGACAGGTTGCTTCTGGTTTCCTGCTCAACTTTATAGGAATCCAATGTATATGATTTCTTATTGTGATGCCATGTTATGCTACGACTCTCGCACATATTCTTTTCAAGCAAGGTCTCCACTTGGTGATTGGAAAATAACTGAAACAAGGGTTAAGTGGCATGTAGTGAGATTATCAGCACCTAATACCTTTGTAAGGGGTTATTATAAGTCCATATGTCTCAGTTACTTGGAACCTGGAGATTATATTGAGATACAAACCAGACCAAATGTTTTAAGTCCTTATGATTGGTCGTTTGCTGAAGTTGGCCATTTGGAATCATGCGACAAGGATGCGCATAATTGTACTTGCAAACATAGTGACACATTGGTGGTGGAATTCAAACACTTACCTGGACGGTCTCTAAATAGAAAATCATTGCTAAAGCGAAACATTTTTAAGGAACAAAGATATATTAATTACTATTTTGGTGGAATCAAGAAACCTAACGACGAGGAAGAGATCACAAAGTGGAAGAGCTTCTTTCCAAACCACAAGCTACCTAAACTTAAATGA 978 0.3753 MARKKTLVASKKRKRRKTQLLDLPNQTIDCILERLSPEELCRVSETCTYLKNQCSSDYLWKKHVQQKWSNLIGDVVHQVWQWHRTKIKYATSFSLHKDVMDTCATFRGTWPFVGIQSYLENHWPYINLVKNYSQKALYTCIETGCFWFPAQLYRNPMYMISYCDAMLCYDSRTYSFQARSPLGDWKITETRVKWHVVRLSAPNTFVRGYYKSICLSYLEPGDYIEIQTRPNVLSPYDWSFAEVGHLESCDKDAHNCTCKHSDTLVVEFKHLPGRSLNRKSLLKRNIFKEQRYINYYFGGIKKPNDEEEITKWKSFFPNHKLPKLK 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03161 325 Gene3D - 5 99 - -
Trre13g03161 325 PANTHER ESTS AU081301(E20138) 11 320 - -
Trre13g03161 325 Pfam F-box domain 20 62 IPR001810 GO:0005515
Trre13g03161 325 SMART fbox_2 23 63 IPR001810 GO:0005515
Trre13g03161 325 SUPERFAMILY F-box domain 18 69 IPR036047 GO:0005515
Trre13g03161 325 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g03161 Trre-Chr13 38097529 38099755 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03161 - - vun:114165017 278.1