Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03160 ATGCAATTATCAAACAAGAGTTTAGCATCAAAATTTGAGCATGGAGAAGAAGAGGTAGAGAAAGTTTCTCTTTTGGATTTGCATGATTTACCATTAGATTGTATCCTTGAAAAACTTTCACCAAGTGAATTATGCAATGTAGCAAAAGTGTGTAAATCTCTTAGAAAAAGATGTAGAAGTGATTATTTTTGGGAGAAACATATGAAGATGAAATGGAGTAAAGTTTTAGGTGATGCTTCTTATAGAGAATGGAAATGTTATGTAGCTTCAAGAAACATAGAAAAAAGTTCAAATCAACACAAAAATCATAAAACAATACTTGATTTTCTTCATGGTTTTCTTCCTTTTTTTTGGATTAAATCAAAATCAGAAAATGATATGAAGTCAAGGCAGCTAGATGATTCAATTGCTGCTCTTTATCTTTCTCTTGAGAATGGAAATTTTTGGTTCCCTGCTCAAGTTTATAACCGTGAGAATGGTCATGCTGGATTCATGCTTTCATGTTATGATGCTCAACTTTGCTATGACTATAGAACAAATACTTTTCAAGCAAGGTATTCACCTAATGGGAGATGGACAATTGAGGAAAACATAAAATGGGAGAGGCTAAGAGTGCCACCTATTGACTCTTCTTCACATGTTCTTCATATCTCTGATTGTTTAGATGATTTAAGGCCTGGAGATCATGTTGAAATCCAATGGAGAAGAAACAAAGAATTCCCTTATGGTTGGTGGTATAGTGTCATTGGTCATTTGGAAACATGTCAAGAGCAAGGGAACCATTGCCAATGTCACAATAAAGATACAGTGATTTTGGAGTTCACACAATACACAGTTGGTTCAAGATGGAGACAAACAATGATAAACAGAAAGAATCATATAGAACAAGGAAATGAAATAGAAGGTTTCTATGGAGGAATAAGAAAGTTGCATAGCAAAGAGGAAATTACAAGGTGGAAGAAACTTTGGCCAACAAAAATTGTGGAATAG 990 0.3394 MQLSNKSLASKFEHGEEEVEKVSLLDLHDLPLDCILEKLSPSELCNVAKVCKSLRKRCRSDYFWEKHMKMKWSKVLGDASYREWKCYVASRNIEKSSNQHKNHKTILDFLHGFLPFFWIKSKSENDMKSRQLDDSIAALYLSLENGNFWFPAQVYNRENGHAGFMLSCYDAQLCYDYRTNTFQARYSPNGRWTIEENIKWERLRVPPIDSSSHVLHISDCLDDLRPGDHVEIQWRRNKEFPYGWWYSVIGHLETCQEQGNHCQCHNKDTVILEFTQYTVGSRWRQTMINRKNHIEQGNEIEGFYGGIRKLHSKEEITRWKKLWPTKIVE 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03160 329 PANTHER ESTS AU081301(E20138) 5 328 - -
Trre13g03160 329 SMART fbox_2 30 67 IPR001810 GO:0005515
Trre13g03160 329 SUPERFAMILY F-box domain 27 285 IPR036047 GO:0005515
Trre13g03160 329 Pfam F-box domain 26 66 IPR001810 GO:0005515
Trre13g03160 329 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Trre13g03160 329 Gene3D - 16 102 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g03160 Trre-Chr13 38061816 38064156 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03160 - - gmx:100806109 522.316