Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03113 ATGGCAACATCTCCATTAACCTCTCTTCTCCCATTCACAAATTCATCAACTAAATCTAATTCAAAGCTCTCACATTTTCGTGCATTCAGAGTCTCAGCTTCTGTCTCAGTTCCTGAAACTCACTTTCAAAACACACCAAGAAGAGAATTCTTAAAGGGTATTGCTCTTTCACTCCCACTTATTGCTCTCACTGATCCACCACAGTCACAAGCTAGAGACGTTGCAGTTGGTTCTTTCCTCCCTCCTTCATCATCAGATCCTTCTTTTGTTCTCTTCAAAGCTTCTCCTAAAGATACTCCTGCCCTTCGTGCAGGAAATGTCCAGCCATACCAGTTTATCCTTCCTCCAACATGGAAACAGCTTCGTATAGCTAACATACTATCAGGAAATTACTGTCAACCAAAATGTGCTGAGCCGTGGGTGGAGGTTAAATTTGAAGATGAAAAACAAGGAAAAATTCAGGTAGTTGCTTCACCTTTGATACGCCTAACCAACAAACCAAATGCAACAATTGAGGACATCGGTAGCCCAGAAAAGCTTATCGCTTCTCTCGGCCCATTTGTCACCGGGAACACTCTTGATCCTGATGAACTCGTCGAGACTTCAGTTGAAAAGATTGATGGTCTGACGTACTACAAATATGTGCTTGAAACTCCTTACGCTCTTACCGGTTCACACAATCTTGCAAAAGCAACAGCAAAGGGAAACACTGTTGTTTTGTTTGTGGCTAGTGCCAATGACAAGCAGTGGCAAACTTCTGAGAAGGTTCTAAAGACCATGCTTGATTCCTTTAAAGTGTAG 801 0.4232 MATSPLTSLLPFTNSSTKSNSKLSHFRAFRVSASVSVPETHFQNTPRREFLKGIALSLPLIALTDPPQSQARDVAVGSFLPPSSSDPSFVLFKASPKDTPALRAGNVQPYQFILPPTWKQLRIANILSGNYCQPKCAEPWVEVKFEDEKQGKIQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTLDPDELVETSVEKIDGLTYYKYVLETPYALTGSHNLAKATAKGNTVVLFVASANDKQWQTSEKVLKTMLDSFKV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03113 266 Pfam PsbP 109 266 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre13g03113 266 SUPERFAMILY Mog1p/PsbP-like 105 266 IPR016123 -
Trre13g03113 266 PANTHER - 12 266 - -
Trre13g03113 266 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 87 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03113 Trre-Chr13 37178792 37181165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03113 - - gmx:100813771 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03113 13 37178792 37181165 Trre13g03113 13 37178792 37181165 ECH