Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03015 ATGATTGGGAATAGATATCCTCAATCTGGGTCTTCTTCTTATGGAGGTGGGACCCACAATATGAAACCAAGGAGACTCTATCAAGTTTGGAGGGGAGGCAATAAGTTTCTCTGTGGTGGCAGACTTGTTTTTGGTCCTGATGTAGCTTCCTTGTTTCTTACGACATTCCTAATTGCCGCACCTGCATTTACATTTTGTGTAAAGATGTATCTTAAATTCAAGAATGAGAAGGCCAGTGGTCATTCTTTTTGGTTTCCTGTAATGATCGGGGGTCTAGTTCTAACTTTTCTGGATTTCTTATTCCTCTTATTGACTTCTGGGAGAGATCCTGGAATTATCCCTAGAAATTCAACGCCTCCTGAATATGAAGATGCATTTAATATACCTACTCCTTCCATGGAGTGGATTAATGGTTCAACCCCTCATCTGAAACTACCTCGAACTAAAGATGTAATGGTTAATGGTCACACAGTGAAAGTGAAGTTCTGTGATACATGCTTGCTTTATCGACCCCCTCGTACTTCTCATTGTTCTATATGTGACAATTGTATCCAGAGATTTGATCATCACTGCCCCTGGGTTGGTCAGTGCATTGGAAGACGAAACTATCGGTACTTCTTCATGTTTATTTCAACATCAACCATTTTGTGCCTATATGTCTTTGTGTTCTCTTGGATCAATCTTTCCAAGAGTGGTGTTTTGGAAGCACTCTCGCATGATTATGTATCGGATCTTCTCATTATATACTGCTTCATTGCCGTCTGGTTTGTCGGTGGCCTCACAGCATTCCATTTCTATCTCATTTGTACAAACCAGACAACTTATGAGAACTTCCGGTACCAATATGATAAAAAGGGGAATCCATACAACAAGGGATCACTAAAAAATATCAGAGAAACACTTTGTTCCAGGATTCCCGCGTCAAGTAATAATTTCCGATCATTTGTACAGCTAGATGAACATATGACAGTTGGGTCATTGACTCCGAATAATGCACATGATATTTTGACTCCAAAGGAGAAAATTGACGTTGAAATGGGATCTATGCACACAGACGACCGTGGTTTTCCAATTCCTGAGCTTCTGCGAAATTTTGATTTTAATAGTTTTGAGGATGACATGAAGTTTGAAGATGATGAGGGACAAACTTCATTTGATCCATTCTATAGTGTTGAGGAAGACGTAAAAGACTCGTCCCGAACATCTGTTGCTACTGTTTTAAATTTCCCTAACATCACAATTGAAGATGCAACGGAAGAGTCTGTTCATAGCTGCCATGCTGATTTCGAAGTCAGAGAATCTGCCGAAAGGCCCATCACTGTTGAGGAAATAAATGCAACTAAAGAAACTGATGACAGAAATGACTCATGTTAA 1374 0.3981 MIGNRYPQSGSSSYGGGTHNMKPRRLYQVWRGGNKFLCGGRLVFGPDVASLFLTTFLIAAPAFTFCVKMYLKFKNEKASGHSFWFPVMIGGLVLTFLDFLFLLLTSGRDPGIIPRNSTPPEYEDAFNIPTPSMEWINGSTPHLKLPRTKDVMVNGHTVKVKFCDTCLLYRPPRTSHCSICDNCIQRFDHHCPWVGQCIGRRNYRYFFMFISTSTILCLYVFVFSWINLSKSGVLEALSHDYVSDLLIIYCFIAVWFVGGLTAFHFYLICTNQTTYENFRYQYDKKGNPYNKGSLKNIRETLCSRIPASSNNFRSFVQLDEHMTVGSLTPNNAHDILTPKEKIDVEMGSMHTDDRGFPIPELLRNFDFNSFEDDMKFEDDEGQTSFDPFYSVEEDVKDSSRTSVATVLNFPNITIEDATEESVHSCHADFEVRESAERPITVEEINATKETDDRNDSC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03015 457 ProSiteProfiles DHHC domain profile. 161 211 - -
Trre13g03015 457 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 56 319 - -
Trre13g03015 457 Pfam DHHC palmitoyltransferase 160 280 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03015 Trre-Chr13 30984724 30987219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03015 87 303 Lipid Metabolism Gene Families AT4G22750 27.615 1.87e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03015 - - gmx:102668608 693.345