Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03001 ATGGGTTCTCAACAAGGTGTTCGTGAGTGGTCTGGAATCAATACATTTGCTCCTGCTACACAGACCAAATTGCTTGAACTTTTGGGAAAACTTAAACAAGAGGATGTGAACTCCTTAACCATACTTGTGATGGGCAAAGGTGGTGTTGGAAAGTCTTCAACTGTGAACTCTATCATTGGGGAAAGAGTTGTTTCAATTAGTCCCTTTCAGTCGGAAGGGCCAAGACCAGTTATGGTATCGCGATCAAGGGCAGGTTTTACATTGAACATTATCGATACTCCTGGTCTTATTGAAGGGGGATACATCAATGATATGGCGCTTGATATAATAAAACGTTTCCTTCTAGACAAGACCATAGATGTTCTGCTTTACGTGGATCGCTTAGATGCGTATCGAGTAGACAACTTGGACAAGTTGGTTGCCAAAGCTATAACTGACAGTTTTGGCAAAGGAATATGGAACAAGGCTATAGTAGCACTCACACATGCCCAATTCTCTCCACCAGATCAATTGCCTTATGATGAGTTCTTCTCGAAAAGATCTGAGGCTCTCTTGCAAGTTGTCAAATCAGGTGCCTCCCTAAAGAAGGATGCCGCTCAGGCTACTGCCATTCCGATAGTTTTGATCGAGAACAGTGGAAGGTGCAACAAAAATGAGAGTGATGAGAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCATCTAGTCCAAACAATTACAGAAGTCGCATTGAACAAAAATGAGTCTATTTTGGTTGACAAGAAGTTGATTGAAGGACCGAATCCAAATCAGAGAGGAAAGTTATGGATTCCTCTCATATTTGCAGCACAATTCTTCTTAATCATGAAGCCTATAGAATCGATGATCAAGAATGACATTGCTAATGAAGAAAGGCCCTCATGGGAGACGCGTGGTGAGAGGCGTGATGTATATGCTTGGAGAGAGAAACGTAATGTAGGTGGTCGTCGTCGGCGTTAA 978 0.4243 MGSQQGVREWSGINTFAPATQTKLLELLGKLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDQLPYDEFFSKRSEALLQVVKSGASLKKDAAQATAIPIVLIENSGRCNKNESDEKVLPNGIAWIPHLVQTITEVALNKNESILVDKKLIEGPNPNQRGKLWIPLIFAAQFFLIMKPIESMIKNDIANEERPSWETRGERRDVYAWREKRNVGGRRRR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03001 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 258 IPR027417 -
Trre13g03001 325 PIRSF Toc33/toc34 1 310 IPR005688 GO:0006886|GO:0009707|GO:0015450
Trre13g03001 325 CDD Toc34_like 8 253 - -
Trre13g03001 325 Gene3D - 2 269 IPR027417 -
Trre13g03001 325 ProSiteProfiles AIG1-type G domain profile. 36 260 IPR006703 GO:0005525
Trre13g03001 325 NCBIfam GTP-binding protein 1 305 IPR005688 GO:0006886|GO:0009707|GO:0015450
Trre13g03001 325 Pfam AIG1 family 39 227 IPR006703 GO:0005525
Trre13g03001 325 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 38 211 IPR045058 -
Trre13g03001 325 FunFam Translocase of chloroplast 3 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03001 Trre-Chr13 30581287 30584797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03001 - - mtr:11438484 545.043