Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02999 ATGGAGGGGAAAAACAAAAGGCTAGCAGTTTTGGTAGGGTGCAATTACCCTAACACTTCCAATGAACTTCATGGTTGCATAAATGATGTATTGGCCATGAAGGAAACATTGGTGAAGCGTTTTGGTTTTGATCATTCCAATATTAAGCTTCTCACTGATGAAACTAAAAACTCTTCATCAACTATGCCAACTGGTGCTAACATTAAGCAAGCATTATCTAACATGGTTGATCAAGCTGAAGAAGGAGATGTGCTTTATTTTCATTATAGTGGACATGGAACTAGAATTCCTTCTAAGAAAAATGGACATCCTTTTCGACACGAAGAAGCTATTGTGCCTTGTGACTTCAATCTTATCACTGATTTGGACTTCCGGCAACTCGTGAATCGGATTCCAAAAGGAGCAAGCTTAACAATTCTCTCAGATTCATGTCATAGTGGTGGCTTAATTGACAAAGAAAAAGAACAAATTGGACCATCTAAATTGGAAGAAGAACAAAATGGCACATTGAAACAAAGTGATCATAAACCAAAAACTATTCCTTATGAGTCAATACTTCAACACCTCTCATCATTAACAAACATAAACACAACAGACATTGGAACACATCTACTTGAGTTTTTCGGCTCCGAAGCGAGTTTGAGATTTCGGCTTCCGGTACTTGATCGTGATTTGTCCCAACCGTTGAAGTCGGATGAAGGGATTCTGTTGAGTGGTTGTCAATCTGACGAGACTTCGGCGGATATGAGTCCGAATATGAGTAATGGAAAGGCTTATGGAGCATTTAGCAATGCTGTTCAGATTGTATTGAAGGACAATAAGGAGAAATTGAGTAATAGAGAGGTTCTGATGAAGGCTAGGGATGTGTTACAAAGACAAGGATTTATTCAACATCCTTGTCTTTATTGTAGTGATGAGAATGCTGGTGATATCTTCTTGTTGCAAAGTTAG 951 0.3849 MEGKNKRLAVLVGCNYPNTSNELHGCINDVLAMKETLVKRFGFDHSNIKLLTDETKNSSSTMPTGANIKQALSNMVDQAEEGDVLYFHYSGHGTRIPSKKNGHPFRHEEAIVPCDFNLITDLDFRQLVNRIPKGASLTILSDSCHSGGLIDKEKEQIGPSKLEEEQNGTLKQSDHKPKTIPYESILQHLSSLTNINTTDIGTHLLEFFGSEASLRFRLPVLDRDLSQPLKSDEGILLSGCQSDETSADMSPNMSNGKAYGAFSNAVQIVLKDNKEKLSNREVLMKARDVLQRQGFIQHPCLYCSDENAGDIFLLQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02999 316 Pfam Caspase domain 6 305 IPR011600 GO:0004197|GO:0006508
Trre13g02999 316 PANTHER METACASPASE-4 4 307 - -
Trre13g02999 316 MobiDBLite consensus disorder prediction 153 176 - -
Trre13g02999 316 Gene3D - 217 312 - -
Trre13g02999 316 Gene3D - 1 199 - -
Trre13g02999 316 SUPERFAMILY Caspase-like 1 118 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02999 Trre-Chr13 30549601 30551139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02999 - - psat:127126532 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02999 13 30549601 30551139 Trre13g02999 13 30549601 30551139 ECH