Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02950 ATGAGCGACGACATATTTGACGGACAAATATTAGCAGAGAAGTTGTTGAAACTCAACAATTCACAACAAAGCATTGAATCATTGTCCCGTTGGTGCATTCCTCACCAGAAGAGAGCAAAGGATATCGTTGAAACATGGGATAAATTGTTCAATGCATCCCAGAAAGAGCAGCGTGTCTCTTTTTTAAACTTGGCCAATGACATCTTGCAAAATAGTAGGCGGAAAGGTAGTGAGTTTGTCAATGAATTTTGGAAAGTTCTTCCAGCAGCTCTCAGGTGTGTTTATGAAAGTGGTGATGTACATGGAAGGAAAGCAGTGAACAGACTTATTGACATATGGGAGGAGAGGAAGGTTTTTGGGTCGCGAAGTCAGGGTCTTAAGGATGAACTGATGAGTAAGAATCCCCTTCCATGCTCTGCAAGCAATGGAAAAGGTTCAGATTCTATCAAGATAGTGAAGAGGGATGCTCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAAAAAATACTAACAGCATTTCATTCTGTTCTTGATGGACATCCTGATGAGGAAGCTGCCTTGAATAAGTGTAATGCTGGTGTACATGATGTGGTTAAACTCTTGGAAGATGTCGAAAAAACATTGGCTCAAGGGAACCAGCTGGGGTCCACTTTGGTGAATGACTTGCAAGAGCGGGAAAAGGAGCTTAAGCAATATATGGAGCAACTCGAAAATGCCGATGCTGCCAGGACTTCTTTGCTTTCTCAGCTTAAAGATGCACTGCAGGAACAGGAATCAAAGCAAGAGCTTGTTCGCGCTCAGTTGCTAGTTGTACGAGGCCAGATTGAGAAAACAGCTGGTATCAGGAAGTGGCTTGACCAACCAACAGAATCCATGCACCCATCAGTTCAACCAAACAACACAACTTCTCAACCTGATTATACGCAATCTTCTGCGTCATTTTCACCTTTTCAAACTTCTGAAGAAGATAACAAGAAGGCAGCAGCAGCAGCTGTTGCTGCTAAGCTCGCTGCCTCTGCGTCGTCTGCTCAGATGCTTGCATCTGTTTTTTCTTCTCTAGTGGCTGAAGAAGCTGCCTCCATGAATAGTAGCTTAAATTCTAAGGGATTTACATCAGGATTACCTATTCTCAACCCAGAGAAAAGGCCCAGAAATGAAAAATCATCGCCTGTTTCTGATGTTAGCAGTTCCGATATGGCGAGCTCTTCCTTTTTCACCACTTTACAACAGCCATCGTTAACAAATCCACAGTTTGTCCCGTCAGCCAACATGCAAACCATGTCTCAAGCCAACCAATTACAAGCTGCATTTGCTTCAGCACCCCTTCCCCCTCAGTATGTCCAATCAACTGGTTTCATGGATGGAACAATTCCTTACGGATATGTATCAAATAACCTACCACCTCCACCTCATTTTCCTCCACATGCTGCACCTAGCTCTCAACCAGCGCAGCAGCAACAGCAGTCATCGCCGGGAGGATTTTACAGGCCACCTGGTATTGGATTTTATGGGCAAAGCCACCCGTCAACGCCGCCACCACCAGTTCATAGGCAGTGA 1566 0.4464 MSDDIFDGQILAEKLLKLNNSQQSIESLSRWCIPHQKRAKDIVETWDKLFNASQKEQRVSFLNLANDILQNSRRKGSEFVNEFWKVLPAALRCVYESGDVHGRKAVNRLIDIWEERKVFGSRSQGLKDELMSKNPLPCSASNGKGSDSIKIVKRDAHSVRIKLAVGCLPEKILTAFHSVLDGHPDEEAALNKCNAGVHDVVKLLEDVEKTLAQGNQLGSTLVNDLQEREKELKQYMEQLENADAARTSLLSQLKDALQEQESKQELVRAQLLVVRGQIEKTAGIRKWLDQPTESMHPSVQPNNTTSQPDYTQSSASFSPFQTSEEDNKKAAAAAVAAKLAASASSAQMLASVFSSLVAEEAASMNSSLNSKGFTSGLPILNPEKRPRNEKSSPVSDVSSSDMASSSFFTTLQQPSLTNPQFVPSANMQTMSQANQLQAAFASAPLPPQYVQSTGFMDGTIPYGYVSNNLPPPPHFPPHAAPSSQPAQQQQQSSPGGFYRPPGIGFYGQSHPSTPPPPVHRQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02950 521 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 7 520 - -
Trre13g02950 521 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Trre13g02950 521 SUPERFAMILY ENTH/VHS domain 16 119 IPR008942 -
Trre13g02950 521 MobiDBLite consensus disorder prediction 466 521 - -
Trre13g02950 521 MobiDBLite consensus disorder prediction 372 399 - -
Trre13g02950 521 Pfam CID domain 10 121 IPR006569 -
Trre13g02950 521 MobiDBLite consensus disorder prediction 288 323 - -
Trre13g02950 521 Gene3D - 4 134 IPR008942 -
Trre13g02950 521 CDD CID_RPRD_like 9 131 - -
Trre13g02950 521 MobiDBLite consensus disorder prediction 481 496 - -
Trre13g02950 521 SMART 558neu5 10 131 IPR006569 -
Trre13g02950 521 FunFam ENTH/VHS family protein isoform 1 3 131 - -
Trre13g02950 521 Coils Coil 222 270 - -
Trre13g02950 521 MobiDBLite consensus disorder prediction 466 480 - -
Trre13g02950 521 MobiDBLite consensus disorder prediction 293 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02950 Trre-Chr13 29732351 29742107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02950 K15559 - gmx:100814308 667.922