Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02920 ATGGTAGAGAGAAATGCTTCTGCCATTAAGGTTGTTTCAAGAAAATCATTATGTTTCTTTTTCACAACAACAACGTTATTATTCATCATGTCATGGCTTTTTGTTCTCCGTTCCACGCGCTCCGATTCAACACAAGCCGCCATTTCACAGCTTATCTCCACAACCTTCGACAACTCCGATTCCGAATCATCTCAATCGCAAAACTCCGAATCCTCGTTCAACAATAGAGCAATTCTTGTAAACACAAAAACACAAACACCTGATATTCCAAAATGCAACACTAACACAACCACATCAAATGACAATAACAATAACAGCAACAACAGCATCATCTTCATCAACAACAACAACAGCAAACTTGTTTTGAAAGTTTTCATGTACGATTTACCTCCCGAATTTCATTTCGGATTATTAGATTGGAAAGGCGACGAAAAAGGAAAAATTGTATGGCCTGATATGAAAACCAATGTACCACATTACCCTGGTGGTTTGAATTTACAACATAGTATTGAATATTGGCTTACATTAGATATTCTTGCATCAGAATTCCCAGAAACTTATCCCAACAATGCTAGAACTGTAATCAGAGTTAAAAACTCAAGCGATGCTGATGTTATATTTGTGCCATTTTTTTCATCTTTGACGTATAACAGATACTCCAAAACCGGTCCGCACGAAAAACGGAGTAGAAACAAGGTGTTACAAGAGAAGTTAGTGAGATATTTGATGAGTCAAGAGGAATGGAAAAGGTCTGGTGGAAGAGATCATTTGATTTTGGCTCATCATCCTAATAGTATGTTGGATGCTCGAATGAAACTTTGGCCTGCAACTTTTATTTTGTCTGATTTTGGAAGATATCCTCCTAATATAGCTAATGTTGAGAAAGATGTGATTGCGCCGTATAAACATGTTGTTGGTTCTTATGTTGATGATCAATCTACCTTTGATAGCAGAAAAACTTTGCTTTACTTCCAAGGAGCTATTTACAGAAAAGATGGAGGCTATGCTAGACAAGAACTATTTTATCTTCTAAAAGATGAAAAAGATGTACATTTTTCATTTGGAAGTGTTCAAAAAGGCGGAGTAAGGAAAGCAACAGACGGCATGCGCTCGTCCAAATTCTGCCTAAACATAGCCGGCGACACACCATCATCAAACCGCTTATTCGACGCCATTGCAAGTCACTGTGTTCCTGTAATAATCAGTGATCAAATTGAGCTTCCATATGAAGATATTCTTGACTACTCCGAGTTCTGTGTATTTGTTCGAACTAGGGACGCTCTTAAAAAGAAGTTTCTGATAAACTTCATGAGGAGTATTGGTAAAGATGAATGGACAAGAATGTGGAACAGGTTGAAAGAAGTTGAAAAATTCTTTGAGTTTCAATTCCCTTCTAAGGAAGGTGATGCTGTTCAAATGATTTGGCAAGCCGTTGCGCGTAAGGTTCCGTTTATAAAGTTGAAAACAAACAGGTCCAGAAGATTTTTTAGGTCCGTTTATGGTAATAATAATAAAGATAAGGGACCTAAATCAATACCTACACCAGCTAATTTTTGGTGA 1560 0.3724 MVERNASAIKVVSRKSLCFFFTTTTLLFIMSWLFVLRSTRSDSTQAAISQLISTTFDNSDSESSQSQNSESSFNNRAILVNTKTQTPDIPKCNTNTTTSNDNNNNSNNSIIFINNNNSKLVLKVFMYDLPPEFHFGLLDWKGDEKGKIVWPDMKTNVPHYPGGLNLQHSIEYWLTLDILASEFPETYPNNARTVIRVKNSSDADVIFVPFFSSLTYNRYSKTGPHEKRSRNKVLQEKLVRYLMSQEEWKRSGGRDHLILAHHPNSMLDARMKLWPATFILSDFGRYPPNIANVEKDVIAPYKHVVGSYVDDQSTFDSRKTLLYFQGAIYRKDGGYARQELFYLLKDEKDVHFSFGSVQKGGVRKATDGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDQIELPYEDILDYSEFCVFVRTRDALKKKFLINFMRSIGKDEWTRMWNRLKEVEKFFEFQFPSKEGDAVQMIWQAVARKVPFIKLKTNRSRRFFRSVYGNNNKDKGPKSIPTPANFW 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02920 519 MobiDBLite consensus disorder prediction 84 105 - -
Trre13g02920 519 Pfam Exostosin family 122 435 IPR040911 -
Trre13g02920 519 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 20 476 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02920 Trre-Chr13 29088109 29090551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02920 - K22846 gmx:100816974 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02920 13 29088109 29090551 Trre13g02920 13 29088109 29090551 ECH