Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02870 ATGGATTATGGTGCTCCAGATTCAGAACATAAAGATGTGGCAGAGTTTGTGGCTAATGATCATGTTTTTGGTCAAGTTGGGAATGTTTGGATTGTTGGGAAGCCTAATTTGGTAACTTATAGAGGACCAACTATGCTTGCTACTACTCTTCATGCTATGGCAATGCTTCTTAGGACATGTCATTGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCCTTGGTCACACAAGATGATCTGATCCAAGTTTTCTCTGAGGTGCCAAGGGATATTAATTTCATACAACATAGTAGTCGCTTGGGTTGGAAACTGAATAAGAGAGGGAAGCCAATGATCATAGATCCTGGACTTTATAGCCTCAATAAATCAGAGATTTGGTGGATCATTAAGCAAAGAAGTTTGCCAACATCTTTTAAACTATACACAGGTTCAGCTTGGACAATAGTATCAAGATCATTTAGTGAGTATTGCATAATGGGATGGGAAAATCTACCAAGAACTCTACTCCTCTATTACACTAACTTTGTCTCATCACCAGAAGGATATTTTCAAACAGTAATATGCAACTCACAAGACTACAAAAACACCACTGCCAACCATGATCTTCACTACATTACTTGGGACAATCCTCCAAAACAACATCCTAGGTCTCTAGGACTTAAAGATTATAGAAAAATGGTTTTGAGTAGTCGTCCGTTCGCGAGAAAATTCAAGAGAAATGATCCTGTTCTTGATAAAATTGATAGAGATCTTTTGAAGAGGTATAAGGGGGGGTTTTCTTTTGGTGGATGGTGTTCTAAGGGTGGAAAGAACAAATCATGTTCGGGTTTGAGAGCCGAGAGTTATGGTTCGCTTAAACCTGGTCCGGGTTCAAGAAGGCTAAAAAATTTGTTAAACAAAATTCTCGCGGATAGATTTTTTCACCAAATGCAGTGTAGGTAA 945 0.3841 MDYGAPDSEHKDVAEFVANDHVFGQVGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLRTCHWDWFINLSASDYPLVTQDDLIQVFSEVPRDINFIQHSSRLGWKLNKRGKPMIIDPGLYSLNKSEIWWIIKQRSLPTSFKLYTGSAWTIVSRSFSEYCIMGWENLPRTLLLYYTNFVSSPEGYFQTVICNSQDYKNTTANHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNDPVLDKIDRDLLKRYKGGFSFGGWCSKGGKNKSCSGLRAESYGSLKPGPGSRRLKNLLNKILADRFFHQMQCR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02870 314 PANTHER GLYCOSYLTRANSFERASE 1 313 IPR044610 GO:0015020
Trre13g02870 314 Pfam Core-2/I-Branching enzyme 4 227 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02870 Trre-Chr13 28181463 28188005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02870 1 314 Glycosyltransferase AT4G27480 57.778 3.10e-136 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02870 - - gmx:100812712 582.793