Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02869 ATGGCCACTTTGAATAACCATAACAGAAATTCACAACCACAAGTTCAACAGCAAAATATTGAGGCACAAGATTCAAGCTTTGTGAACACAACAACAGTGGCAGGACAAACAGTGAGAAGGGTATTCAAGATTCTTTTCTACTTGAATCTGGTTTTGATTTCATTCTTGGTGATTTTCATCACCATCTATGGTCTGATCTTAGACTCATTAACTCACCATTTTCACCCTGAGAAATTGTATCCTCCACTTCTAGTATCGACAGTATGTGCAGGAATTCTTGGTTTCACGTGGCAATGGATCGTCGCATGCCACCCAAAAAAGTCACTCAAGGCAGCATTTTGGTTGAGTCCATTGTTAACATGCGCGTTGGGAATTATGTTTGTGTTAATTGGTTCTGCATTAAGTTTGATAGCTGGTATAGTTTCTTTGATTTCTGCAGTGATTCAAGCTCTTTATGGTTGTTGGGTCGCTAAGAGGTTTGTATATGCGGGCGAAATCTTTTCGGTTTCAATAGCTTATCCTCCTGCTAAAACCAAGTTCTTAGCATGTTCGTTGATCATCGTTAGTACTGTTTACTGTTGTTTTCTGGTGGCTGGAATTGGTGGGGCAAGGGCTATGGAACACAGAACCAAACCATCCGACGTTTTAATCTTAGTAATCATCCTGAGCTTAGGATGGACTATGCATGTTATGAAGAATGCAATGCAAGTCACAGTTTCAAGGGTCAAGTATATGCATTTTTCTGGAGGAGGTGACATAGACACTAGATTTGCATTTCGCGACACAATCAAGCAATTAATTGGAAGTGTTTCTGTAGGCTCTATCCTGGTTCCGATCATAGGACTCTTCCGAGGCTTTGCACGATCAACAAGTCTTATCGGAGGAGAAACAAACGAGTGCATGTTTTCTTGTGTTAGTTGTTCGATGGGAATTGCGTCGCTTCTTGTGACAAAGGGGAATAGATGGGGTTTTGTGCATGTTGGAGTTTATGACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGAAATGTTCATCAGAGTTGGATTAGAGGAGTTGATAGATTTAGATCTCACTGGTGCATTCTGTTTTCTTAGTGGTGTTTCAGTAGGTGCAATTTGTAGTCTTGTGAGTGGAATTTGGAGTCTTGTAGAGTATAAGGACTATGCTATGGAAGTATCTACTTATGCTTTCATCATTGGCTATTTCATGTGTAGGTTGGCTATTGCATGGCCACAAGCATGTGTTTCAGCTTACTATGTGGCCTATGCAGAGAATCCACAAAGCACTCAATTTGATTCAACTATTCCAGTACGTTTGGAGCAGCTTCACAGATCTCAAGCTTTACAAGAGTTAAGAACAATTAGATGA 1371 0.4048 MATLNNHNRNSQPQVQQQNIEAQDSSFVNTTTVAGQTVRRVFKILFYLNLVLISFLVIFITIYGLILDSLTHHFHPEKLYPPLLVSTVCAGILGFTWQWIVACHPKKSLKAAFWLSPLLTCALGIMFVLIGSALSLIAGIVSLISAVIQALYGCWVAKRFVYAGEIFSVSIAYPPAKTKFLACSLIIVSTVYCCFLVAGIGGARAMEHRTKPSDVLILVIILSLGWTMHVMKNAMQVTVSRVKYMHFSGGGDIDTRFAFRDTIKQLIGSVSVGSILVPIIGLFRGFARSTSLIGGETNECMFSCVSCSMGIASLLVTKGNRWGFVHVGVYDKGFVQASSDTWEMFIRVGLEELIDLDLTGAFCFLSGVSVGAICSLVSGIWSLVEYKDYAMEVSTYAFIIGYFMCRLAIAWPQACVSAYYVAYAENPQSTQFDSTIPVRLEQLHRSQALQELRTIR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02869 456 Pfam Plasma-membrane choline transporter 141 427 IPR007603 GO:0022857|GO:0055085
Trre13g02869 456 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 17 447 IPR007603 GO:0022857|GO:0055085
Trre13g02869 456 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02869 Trre-Chr13 28167853 28170077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02869 - - gmx:100818674 654.44