Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02868 ATGGCTTCTTCATCTACTCTTCAAATTCAAATGGCAACATCAAAATTCAGTCTTTCTCCAAACGCTTCAGCGTTGAAGATGATTGTTAATCCCAATAACAGCACAATAAATTTTGGGTCCAATTTCAAAGTTCATGTTCTTTCCTCTAACAACAATGGTTCAGCTTCTAGCTGTTCTTCTCGTGGGTCTGTATCAAGTTTAAAGAAAGATGAGAACAGACGCAGAAGTGATCTTGAGGCTCTGTTCTGTTACGATAAAGCTATCCCAGAAGAAATAATTGAAAAGCCTGTTGGGTTATCATTGTCCGAAAAAGCTATCGGTAACAATTGCCAGTGCACCGATTGCCATGCCAAAGGTGCTGTGCTTTGCACCACTTGTGCTGGTTCTGGTCTTTACGTTGACTCTATAATGGAAAGCCAGGGCATAATCGTTAAAGTTCGTTGCCTAGGTTGCGGGGGAACTGGCAATATAATGTGTACTGAATGCGGGGGACGAGGTCATCTAGGACCCAAATGA 516 0.4205 MASSSTLQIQMATSKFSLSPNASALKMIVNPNNSTINFGSNFKVHVLSSNNNGSASSCSSRGSVSSLKKDENRRRSDLEALFCYDKAIPEEIIEKPVGLSLSEKAIGNNCQCTDCHAKGAVLCTTCAGSGLYVDSIMESQGIIVKVRCLGCGGTGNIMCTECGGRGHLGPK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02868 171 MobiDBLite consensus disorder prediction 51 65 - -
Trre13g02868 171 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 106 168 IPR036410 -
Trre13g02868 171 MobiDBLite consensus disorder prediction 51 70 - -
Trre13g02868 171 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 23 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02868 Trre-Chr13 28164932 28167153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02868 - - mtr:11430153 259.996