Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02861 ATGGACTTCACTCACTCTCACATTCACTCCACCAACCACCGCATCACCGATCCTAATGGGATGTGGAGTGTAGCGAAGATGGAACGTCAAATTCATTGTCTGGAAATTCATGCTTACAATTCCTTGTTGAAGGCTTTTATTGCTCAATCAGAAGTTCTTACTTGGGGAAAAGAGGGGCTCTTGACTCAAATACGGAAGGAACTACATATTGCAGATTCTGAACATGGAGAAATGTTGTTGAAATTTAACTCTGATGAGACTATTAAACGGATAAGGGAGCAAAGGAAAATGGCATCTCAGTCTCATGCTCAGGCTTATCATAATTCTAATAGTACTGGGCATCTGTCTGCCTCTAGTGAAAATTCAGTTATAAGATTGAAAGATTCACCCTCCTCTACATTTTATCCTCAGAAGAATATACTGCACAATCAAGCTTCTTCAATGCCTGCGAGTAATATATGCCCTAATGGAACCATGCTGAAGTATAACGACAATTTGTTGACTGTGCAATTAGCCCATGGAAAGGCTGAGCCACCAAAGGAAATGTTTAACTATGATGCTCAGTTATCGCCAAGTGGAAGTGGGAGTGTGCCGAAAGGAAACTATCATAATAAGCAGCAAATTTACTCATCTGAGTCTCCTGTGTTAAACAACAGATCTGATTCCATTTCCCCTAGTGGAATATGGAGTGTGTCGAAAGGAAACTATCATAATAAGCTTCCCTTTTACACATCTGAGCCTCCGGTGTTAAACAACGAATCTGATTTCATTTTGCCCAGTGGAAGAGGGAGTGTGGTGAAAGGAAACTATCATAATAAGCAACTCTTTTACTTATCCGAGTCTCCCGTGTTAAATAATGAATCTGATTTCATTCTGTCTAGTGGAAGAGGGAGTGCGCCGAAAGGAAACTATCATAATAAGCAGCCCTTTTACTCATTCGAGTCTCCCGTGTTAAACAACGAATATGATTTCATTCTTCCTAGTGGAAGAGGGAGTGCACCGAAAGGAAACTATCAAAATAAGCAACCCTTTTACTCATTTGAGTCTCCAGTGTTAAACAATGAATCTAATTTCATTCGGCTCCGTTCAACTTACACGATTATCAATGGGGTTGAGAATATGCTTTTCAACAGGGAGAATCCTGAGCCAGTTGCCATTGAGATAGCGAAACAGACTCTTCATGAGCAAGAAAGAGATTTACTTGAAGCAATCGGTAAACTGGAGAATGTGTTAGAAGATGATGATGATGATGAGGCCCCGCAAAATGTCCAAGACTTCTCAGGGGGGACAACAGATGATTGTCCATTTGAATAA 1314 0.4056 MDFTHSHIHSTNHRITDPNGMWSVAKMERQIHCLEIHAYNSLLKAFIAQSEVLTWGKEGLLTQIRKELHIADSEHGEMLLKFNSDETIKRIREQRKMASQSHAQAYHNSNSTGHLSASSENSVIRLKDSPSSTFYPQKNILHNQASSMPASNICPNGTMLKYNDNLLTVQLAHGKAEPPKEMFNYDAQLSPSGSGSVPKGNYHNKQQIYSSESPVLNNRSDSISPSGIWSVSKGNYHNKLPFYTSEPPVLNNESDFILPSGRGSVVKGNYHNKQLFYLSESPVLNNESDFILSSGRGSAPKGNYHNKQPFYSFESPVLNNEYDFILPSGRGSAPKGNYQNKQPFYSFESPVLNNESNFIRLRSTYTIINGVENMLFNRENPEPVAIEIAKQTLHEQERDLLEAIGKLENVLEDDDDDEAPQNVQDFSGGTTDDCPFE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02861 437 MobiDBLite consensus disorder prediction 411 437 - -
Trre13g02861 437 PANTHER PROTEIN EMSY-LIKE 4 333 415 IPR033485 GO:0050832
Trre13g02861 437 Pfam ENT domain 28 95 IPR005491 -
Trre13g02861 437 SMART ENT_2 27 100 IPR005491 -
Trre13g02861 437 Coils Coil 393 413 - -
Trre13g02861 437 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 27 117 IPR005491 -
Trre13g02861 437 SUPERFAMILY ENT-like 25 107 IPR036142 -
Trre13g02861 437 Gene3D ENT domain 21 159 IPR036142 -
Trre13g02861 437 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02861 Trre-Chr13 28001269 28005401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02861 - - tpra:123890568 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02861 13 28001269 28005401 Trre13g02861 13 28001269 28005401 ECH