Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02860 ATGCATTCTGATCTTCATTCAGCTGGTTATTTTCTTAATCCACAATTTCAATATGGAGTTGAACATGGAGATGATGTATATAAGGAAACATTTGAAGGGACGGCTAGAGTGATAATTAAATTAGAAAGAAGTATAGATGATCAAATAAAAGCTTTAAATCAGTTGACTCTTTATAGAGAAAAGATGGAAACATTTGGTACACCTTTGGCTCAAAGATCTTGGTCAAAGATGACCGCGGATTATTGGTGGGAGAATTACGGTACATGTGCTCCTGAACTTCAACGTCTAGCTATAAAAGTTGTTAGTCAAACAACTTCTGCTATAAATTGTGAGAGAAACTGGAGTACATTTAGTTATATTCACACAAAGACAAGGAATAGGCTTAAGTATAAAAAGTTGCATAAACTTGTCTTCACACATTACAACATGAAGTTGAAAATGAGGCATGAAATGAGGAGAAGTCAAGAGGAAATAGATGCAAGTTTTGATCCTATAAATCTTAACTATATATTTCAAGAAGATCCGCTATCTCCGCTATCTCAATGGATAGAAGAGAGAGAAAATCCATTATTGGATGGAGTTCAAAATGCAGAATGGTTGCCTATAATAGATACAGATGATGAGATCGTGGAAGTTGATGATGATAACAATGAATCAAATGACAGTGGTGATGGTGGTGGTTTAAGTCCACCAAGCGGTAATGGTGGTGATGGGGGTGGTAATGAAGAATCTAACGAAGGTGATGGTGGTGGCGGTGATGATGAAGAAGATGCACCAGTAGATCAAGATCCATATGGTGAAACACCGCCTATTTATAGGCGTTATAGAAACTTGACTGATATGGATCGTTCTGATAGTTCACTACTTAATAGTGGAGGAGATGTGTCACATTCTAGAAGGGGTAAAAGGAAACAAAATGTTCCACTTGAAGATTCTTCTTCTTCTTCTTCTTCTTCTAGTATTGCTCAGAGTTTTAGTGACTTTGGGATTGGTGACTCTTCTCAAATTAGTCAACAATCTTATCCACCTATTTATCAATATCCTTATTTCAATTCATATAACCAATATCCAAGTGATCAAGCTCCTTCCAACTATCAACAATCAATGAATTACGAAGATCCTTATTATCATCAATCAAGTGGTGGATATTTTGGTTATGTCTTTGGGCAAGGAGCTTCACAGGATGATAGTCAGAGTGAAACTACAAGTAATGCTCCTCCACGTCATTCCACCATGTGGTAA 1242 0.3663 MHSDLHSAGYFLNPQFQYGVEHGDDVYKETFEGTARVIIKLERSIDDQIKALNQLTLYREKMETFGTPLAQRSWSKMTADYWWENYGTCAPELQRLAIKVVSQTTSAINCERNWSTFSYIHTKTRNRLKYKKLHKLVFTHYNMKLKMRHEMRRSQEEIDASFDPINLNYIFQEDPLSPLSQWIEERENPLLDGVQNAEWLPIIDTDDEIVEVDDDNNESNDSGDGGGLSPPSGNGGDGGGNEESNEGDGGGGDDEEDAPVDQDPYGETPPIYRRYRNLTDMDRSDSSLLNSGGDVSHSRRGKRKQNVPLEDSSSSSSSSSIAQSFSDFGIGDSSQISQQSYPPIYQYPYFNSYNQYPSDQAPSNYQQSMNYEDPYYHQSSGGYFGYVFGQGASQDDSQSETTSNAPPRHSTMW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02860 413 Pfam hAT family C-terminal dimerisation region 73 143 IPR008906 GO:0046983
Trre13g02860 413 SUPERFAMILY Ribonuclease H-like 3 148 IPR012337 -
Trre13g02860 413 MobiDBLite consensus disorder prediction 212 376 - -
Trre13g02860 413 MobiDBLite consensus disorder prediction 308 375 - -
Trre13g02860 413 MobiDBLite consensus disorder prediction 247 262 - -
Trre13g02860 413 MobiDBLite consensus disorder prediction 391 413 - -
Trre13g02860 413 MobiDBLite consensus disorder prediction 388 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02860 Trre-Chr13 27975472 27976979 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02860 - - tpra:123911085 628.246