Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02854 ATGTATCTCCCCCGCCACATACTCATCAGAACCTTCATCCACCGCCGTCCCTTCTCCCATTCCTCCGCCGCCGCCATCCTCCACCCTCCAGAGCCAGACCTAGAGCCACTCACCTACCTCCCTGGCTTTCCAAAACCCGACCCTAAGTACGACGAAACCATCCTCGCGATTCCCCGCAGAGATTCCGGTAAGAACATTTCCGCCAAGGAGCGCAAAGTAGGTCGCGTTCCGAGCATCGTATTCGAACAGGAAGACGGCCAGCACGGCGGTAACAAACGCCTCATTTCCGTTCGCTCCGATCAGATCAGGAAGCTCGTTAACCATCTCGGACGCTCCTTCTTCCTTTCTCGTCTCTTCAACCTCCAAGTCCTTCACCAATTCGACTCCGATTCGAACTCCAACGATGACGATGTCATCGAAAACGTTCGCGTTTTGCCTCGCAGTATTCATTTGAAAGCTGGTACAGATGCACCTTTGAATGTTACATTTATAAGGGCTCCATCAGAAGCTTGGTTGAAAGTTGATATTCCTATTGTATTCAGAGGAGATGATATATCCCCTGGACTCAAGAAAGGTGCTGCTTTGAATACCATCAAAAGGACTGTTAAGTACCTATGCCCTGCAGACATTATTCCCCCGTATATTGACGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGGTGCTCATGGGCGATCTCAATGTTCATCCTGCATTAAAACTTCTTCACTCAAAAGATGATGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAAACACAACCAAAGAAATCCAAGTAA 801 0.4844 MYLPRHILIRTFIHRRPFSHSSAAAILHPPEPDLEPLTYLPGFPKPDPKYDETILAIPRRDSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFNLQVLHQFDSDSNSNDDDVIENVRVLPRSIHLKAGTDAPLNVTFIRAPSEAWLKVDIPIVFRGDDISPGLKKGAALNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLLHSKDDAVCKIMGQRVSETQPKKSK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02854 266 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 29 259 - -
Trre13g02854 266 Pfam Ribosomal L25p family 56 163 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Trre13g02854 266 SUPERFAMILY Ribosomal protein L25-like 58 254 IPR011035 GO:0006412
Trre13g02854 266 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 169 255 - -
Trre13g02854 266 Gene3D Ribosomal protein L25, beta domain 170 261 IPR037121 -
Trre13g02854 266 Pfam Ribosomal protein TL5, C-terminal domain 173 254 IPR020057 -
Trre13g02854 266 Gene3D Ribosomal Protein L25; Chain P 53 166 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02854 Trre-Chr13 27835371 27840572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02854 K02897 - gmx:100809143 410.609