Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02852 ATGGGAATGAGCGCGGGTGAATTGATGGCTATGGAGCGCTTCTTCATCTTCTCGTTCTTCCTCATCTCTTCTTCACTCGCCACCATTGATCAACATCACACTCCTCTCACTCTCAAAGGTATTGATATCGAAAGACCAAATTTGGATGTATCTCCTTCTTTACTTTTGGGGAACTCTGATTCTCAAGGCGTTAAAAAAAATCTGCGATGTGAGCGCGTTCAAGTTTCTGGTATCTCAAGATTGAAACTCAAGAGCTATGCTAATTCATACCATATTACTTTGGCTCCATCCGTTGCAATTCCAGAAAGATTACATAGCAAAATCAAGGTTTGTTTTCATGGGAATAATACTCTTGGATGGTGTCAGTGTGAAAAGGATGAATGGAAGGGTGTACAGAAGGGGATATGGAATGCAGTTATGTCACCTTATCAAACTCGATATGTTGATATCAAGATTGATGGTGAACTATCGGGTTCTGTTACAGTTGCACTTGAAGAAGGTTTTCAGCAATGGCGCCTCATTAGTCTTGCAGCTGGATTGTTAATGCTGCTGTTGGCTCCAATTGTTAGCAGTTGGGTTCCGTTTTATTATAGCAGTTCCATGGCTATAGGAATCTTTCTTGTCATTATAATTGTTCTTTTTCAGGGCATGAAATTATTGCCAACTGGAAGAAAAAACATCTTTTACCTTACCATATATGGATCAGTGCTTGGAGCTGGGTCATTCCTTTTGCACCAATTCTCTATGATCGTAAATTCAATTCTTCAGAGCTTTGGGATGAGTGAAGAGATGCACAACCCAGTTGCGCTTTTTGTACTACTGGGTATCATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTCAGAAGATTTGTTATTTCAAAAGAAGATGGTAGTGTGGATGCCGGGGTTGCTCAGTTTGTGAAATGGGCAATGCGTGTTATTGGGACTACCTTCATTTTGCAGAGCACTCTTGATACTCCTCTTGCAATTGGAGTCTTGGTCTCTTGTGGAGCTGTTTGCAAACTTTTTTCATCAATAGAATCGCTTCATGGGTGGTATGAAACTTCAGGGAGTGATGATTATTCATTGGAGTGGCTGAGAGGAACTCGTGGTCGTGCTGAATTCCTTAGCAAGTCGCCTCCTAAAGGAAAAATGTGGAATAGCCCTAAAGTTGGCTCTAAAGGAAAATTGTGGAACAACCCTAAAAGGACCTCATGGTCTGACTCTCCTGTGACAGGTGTTGTATCACCGTCTTCTGCATTCTCGCCACAAACTCCTGTGACTCAATTAGGGGGAGATTATTATTCAACCTTCCACAAGACTGACAACAGAAAGAAGTTCACTAAGGAAGAGTGGGATGACTTCACAAGAGACTCCACAAAGCAAGCTTTAGCTGAATGGGCAGCATCTCCAGAATTCACCGATTGGATCGTTGAGCATGCAGATCGGATAAAATTGCTTCCGAGCGAGAGTTCGGATGAGACAATGGGGAGTGAATCGGATTCCATGGAGGCCGAAAGTGGAAATGGATTTCGGATTTTTAATTGGAAGTGA 1557 0.4239 MGMSAGELMAMERFFIFSFFLISSSLATIDQHHTPLTLKGIDIERPNLDVSPSLLLGNSDSQGVKKNLRCERVQVSGISRLKLKSYANSYHITLAPSVAIPERLHSKIKVCFHGNNTLGWCQCEKDEWKGVQKGIWNAVMSPYQTRYVDIKIDGELSGSVTVALEEGFQQWRLISLAAGLLMLLLAPIVSSWVPFYYSSSMAIGIFLVIIIVLFQGMKLLPTGRKNIFYLTIYGSVLGAGSFLLHQFSMIVNSILQSFGMSEEMHNPVALFVLLGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRVIGTTFILQSTLDTPLAIGVLVSCGAVCKLFSSIESLHGWYETSGSDDYSLEWLRGTRGRAEFLSKSPPKGKMWNSPKVGSKGKLWNNPKRTSWSDSPVTGVVSPSSAFSPQTPVTQLGGDYYSTFHKTDNRKKFTKEEWDDFTRDSTKQALAEWAASPEFTDWIVEHADRIKLLPSESSDETMGSESDSMEAESGNGFRIFNWK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02852 518 MobiDBLite consensus disorder prediction 492 506 - -
Trre13g02852 518 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 11 493 - -
Trre13g02852 518 Pfam NEMP family 162 443 IPR019358 -
Trre13g02852 518 MobiDBLite consensus disorder prediction 489 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02852 Trre-Chr13 27827872 27832900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02852 - - psat:127126609 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02852 13 27827872 27832900 Trre13g02852 13 27827872 27832900 ECH