Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02849 ATGGGGACTCTAACAAATTGCAGTTTAGTTCCTCTAAACTCAGAATTCCGGTTCAAACCGGTTCGCCACACCTTCAAGAACAAAATTCAGTGCCACAGTCTCAATTCACACTTATCTAAATGGGGAAAGTTGAAGCACGTTCATTTCGATAGGTTTAGGTGTTTTTCAATCAATAACAAAGATGCTGTTGATGGTGAAGGAGAAAATGGTAACAACAACAACAACAATAACAATAACGATTCTAAATCCAATGTAACAACTGTGGTTCCTGATGAAGATAAATCAACAACCCCTTCCACTTCTCAAAGGTCATCTCTGTCCTCACTTGGATCTGCATACAACAATTTTCAAGTTGATTCTTTCAAACTCATGGAACTCCTTGGACCCGAGAAGGTTGATCCTGCTGATGTAAAGAAAATTAAGGATAAGCTTTTTGGTTATTCGACCTTTTGGGTGACGAAAGAGGAGCCTTTTGGGGAACTAGGAGAAGGCATTCTTTTCATTGGCAATTTAAGGGGAAAGAGAGAGGATGTTTTTGCCATACTCCAAAATCGGCTAGTTGAGGCTACTGGCGATAAGTACAACCTTTTCATGGTGGAGGAACCTGATTCAGACAGTCCTGATCCAAGGGGTGGTCCACGTGTTAGCTTTGGTTTGCTGCGGAAGGAGGTTTCTGAGCCAGAGGAAACAACACTTTTTCAATATGTCATTGCATCTTTGTTGTTTCTTCTCACTTTTGGTACCTCAGTGGAGCTAGGAATTGCATCTCAGATCAGCAGACTCCCCCCAGAACTTGTGAAATTCTTGACGGATCCTAGCTATACTGTACCACCAGATGTGGAGATGCTATATCCATATGTTGAGTCAGCATTGCCTCTAGCATATGGTGTCTTGGGGGTTCTTCTATTTCATGAGGTTGGACACTTTTTAGCTGCATTTCCCAAACAAGTAAAATTAAGCATTCCTTTCTTCATTCCCCACATCACACTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCCATCCTTCCTGATAGAAGTACACAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTGCTATCATTTTCGATGTTTGCTGTTGGTCTTCTCCTTTCATCAAATCCAGATGCAGCTGGAGATTTGGTGCAAGTTCCTAGCATGTTGTTTCAAGGTTCTTTGCTACTTGGTTTAATCAGTAGAGCAACTCTTGGTTATGCAGCAATTCATGCAGCAACAGTTCCAATCCACCCTCTTGTGATTGCAGGATGGTGTGGCTTAACTATACAAGCTTTCAACATGCTTCCAGTGGGGTGCCTTGATGGTGGGAGGTCAGTGCAGGGTGCTTTTGGAAAAGGTGCATTAACGGTCTTTGGTTTGACCACTTATACATTGCTAGGGTTGGGAGTGCTTGGTGGTCCTCTTTCACTTGCTTGGGGATTTTTTATTATATTTTCGCAGAGGTCACCGGAGAAACCATGCTTAAATGATGTGACAGAAGTTGGAACATGGAGACAGACATTTGTTGGCGTTGCTATTTTTCTAGCTGTCTTAACTCTTCTTCCTGTTTGGGATGAGCTCGCAGACGAACTGGGCATAGGTCTTGTAACCACATTATAG 1626 0.4262 MGTLTNCSLVPLNSEFRFKPVRHTFKNKIQCHSLNSHLSKWGKLKHVHFDRFRCFSINNKDAVDGEGENGNNNNNNNNNDSKSNVTTVVPDEDKSTTPSTSQRSSLSSLGSAYNNFQVDSFKLMELLGPEKVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGILFIGNLRGKREDVFAILQNRLVEATGDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLFQYVIASLLFLLTFGTSVELGIASQISRLPPELVKFLTDPSYTVPPDVEMLYPYVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGAVLSFSMFAVGLLLSSNPDAAGDLVQVPSMLFQGSLLLGLISRATLGYAAIHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSVQGAFGKGALTVFGLTTYTLLGLGVLGGPLSLAWGFFIIFSQRSPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELADELGIGLVTTL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02849 541 PANTHER ZINC METALLOPROTEASE EGY1 53 535 IPR044838 -
Trre13g02849 541 MobiDBLite consensus disorder prediction 65 107 - -
Trre13g02849 541 CDD S2P-M50_like_2 240 487 - -
Trre13g02849 541 MobiDBLite consensus disorder prediction 64 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02849 Trre-Chr13 27779489 27784866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02849 K25380 - gmx:100808073 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02849 13 27779489 27784866 Trre13g02849 13 27779489 27784866 ECH