Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02846 ATGGAGGTTGGTTTGGTTGAACAAGGTAGAGAAAGAGTTGGACATGTTAATAAGGTTGGTTATGTGAAAAGAGTCATTGCAAAGAAAAGGAATAAGCCTTATAACCGTAGGGTTAAGAGGAATGTTCCAAAGGCACTTCAAGAGCTATTTGATTCATGCAAACAAACATTCAAAGGTCCTAACACGGTTCCTTCACCACAAGATGTTCACAAACTTTGTCACATCCTTGATAACATGAAACCAGAGGATGTTGGACTAAGTAGAGATCTACAATTTTTCAAGCCTGGAAATATTATTAAAGAGAACCAAAGGGTCACATATACCACAGTTTACAAGTGTGACAATTTCTCTCTGTGTATATTTTTCTTACCTGAAAGAGGAGTCATTCCACTCCATAACCACCCGGGCATGACTGTTTTTAGCAAGCTTTTATTAGGACAAATGCACATTAAGTCTTATGATTGGGTTCATTCTCACAACTTGTTGCAACAACAACAACCATCAAAATTGAGATTGGCAATGTTAAAGGCAAACAAAGTGTTCACAGCACCATGTGATACTTCAGTTTTGTATCCAACTACTGGAGGCAACATTCATGAATTCACAGCCATAACTCCATGTGCTGTTCTTGATGTAATTGGTCCACCTTATTCTAAAGAAGATGGCAGAGATTGTTCATATTACAGAGATTACCCTTGTGATACTTTTCCTAACGAGGAAGAGATTGGTAAGGTGAAAGACAAAAATGATAGTTATGCATTGTTAGAAGAAATTGAGATGCCAGAAAATTGTCAAATGGATGGAATTGAATATCTTGGTCCTCCTATTAATGACACAGATTTTTAG 846 0.37 MEVGLVEQGRERVGHVNKVGYVKRVIAKKRNKPYNRRVKRNVPKALQELFDSCKQTFKGPNTVPSPQDVHKLCHILDNMKPEDVGLSRDLQFFKPGNIIKENQRVTYTTVYKCDNFSLCIFFLPERGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVHSHNLLQQQQPSKLRLAMLKANKVFTAPCDTSVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDGRDCSYYRDYPCDTFPNEEEIGKVKDKNDSYALLEEIEMPENCQMDGIEYLGPPINDTDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02846 281 Pfam PCO_ADO 75 276 IPR012864 GO:0016702
Trre13g02846 281 PANTHER UNCHARACTERIZED 46 275 IPR012864 GO:0016702
Trre13g02846 281 CDD cupin_ADO 114 218 - -
Trre13g02846 281 SUPERFAMILY RmlC-like cupins 43 232 IPR011051 -
Trre13g02846 281 Gene3D Jelly Rolls 37 243 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02846 Trre-Chr13 27761812 27763815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02846 K23953 - gmx:100805411 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02846 13 27761812 27763815 Trre13g02846 13 27761812 27763815 ECH