Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02771 ATGGAACCACCAACACCAAGGTTCATACACATAAAACTAATTTCCTGCAAAAACATTAACGCCTTCAACTTCTTCCAAAAACTAACCCTTTACGCACAAGTCTCAATTTCAACCACCAACCCAAAAACAAACCTCACAGAAGACCAAAAACAACAACAGAAAACGCCAACACACAGAGACACCGATGACGACGGAACAAACCCTGAATGGAACCACCAAACTCGTTTCAATTTATCTTTCCTCTCTCAACATTCAGATCCGACTGAATTCTTCTTATGTTTTGAGTTTCGACACGATGGTATCATCCTTGGCGACAAGATCCTCGGAGAATGCCGTGTTCCGTTAATTGATCTGATTCGTGATGTTGACGGCGTCGCGAGATTCGTTTGCTATGAGATTCGTTCAGGTGATGGGAAACCGAATGGGATCTTCAATTTTTCGTATAGATTGGAAGGAATTGGGAATGGTAATGGGATTGGGATCCACTCGTCGGAGATTCTTGATGGAAGAATCTCTGGATACCCTGTTCTGACGCCGGAGGATTGTGCTCCGGTGAAATATCCTCTATCGGAAATTGAGAGACCGTGTTGTTATCCCACGGTTGGTTCTGTTCATGACGGAACGTTTGCGGTGGCGTCTCCACCGTCTGTTTCATATCCACCGACCGGAGAGTATCATTGTTATTATCCACCGGTTCAGCCGTCGGTGTATCCGTATCCTCCGCCGCCGCCTCCTGCAGCGGAGCGGCTTTACCCGCCTATTGGGCCTGAGGCCCATTATTGGCAATCTGGCCCGTATTTTGAAAACAGCTCAAAAACAAGTTATGGCCGACGAATCTAA 840 0.4643 MEPPTPRFIHIKLISCKNINAFNFFQKLTLYAQVSISTTNPKTNLTEDQKQQQKTPTHRDTDDDGTNPEWNHQTRFNLSFLSQHSDPTEFFLCFEFRHDGIILGDKILGECRVPLIDLIRDVDGVARFVCYEIRSGDGKPNGIFNFSYRLEGIGNGNGIGIHSSEILDGRISGYPVLTPEDCAPVKYPLSEIERPCCYPTVGSVHDGTFAVASPPSVSYPPTGEYHCYYPPVQPSVYPYPPPPPPAAERLYPPIGPEAHYWQSGPYFENSSKTSYGRRI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02771 279 Gene3D C2 domain 2 141 IPR035892 -
Trre13g02771 279 SMART C2_3c 8 127 IPR000008 -
Trre13g02771 279 ProSiteProfiles C2 domain profile. 1 129 IPR000008 -
Trre13g02771 279 PANTHER INGRESSION PROTEIN FIC1 7 179 - -
Trre13g02771 279 MobiDBLite consensus disorder prediction 52 69 - -
Trre13g02771 279 CDD C2_SRC2_like 9 146 IPR044750 GO:0006952
Trre13g02771 279 Pfam C2 domain 10 117 IPR000008 -
Trre13g02771 279 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 152 IPR035892 -
Trre13g02771 279 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02771 Trre-Chr13 26718839 26720377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02771 - - tpra:123891712 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02771 13 26718839 26720377 Trre13g02771 13 26718839 26720377 ECH