Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02749 ATGGCTTCGGCTACTTTCTCTGTAGCCAAACCAGCTATTAAGGCAAATGGGAAATGCTTTTCTTCTGAATTCAATGGTCTCAGAAACTCATCAGGATATCTTCACTTATCTAGCAAAACTTCTGATGAGTTCCATTCTGTTGTTTCCTTCCAAACCAATGCAGTTGGTGGAAGTAGTGGAGGATACAAGAAAGCTCTTGTAGTAGAAGCAAAACAACTTAAGGTAGCCATAAATGGATTTGGAAGGATTGGAAGGAACTTCTTGAGATGTTGGCATGGTCGTAAGGATTCGCCTCTCGATGTCATTGCTATCAATGACACTGGAGGTGTAAAACAAGCTTCTCACCTTCTCAAATATGATTCCACACTTGGAATCTTTGATGCTGATGTTAAACCTGTTGGCAATGATGGTATCTCTGTTGATGGAAAGGTTATCAAAGTTGTTTCTGACCGTAACCCTGCTAATCTTCCTTGGGGGGAATTGGGGATAGACTTGGTGATTGAAGGAACTGGGGTGTTTGTGGACAGAGAAGGTGCAGGGAGGCACATTACAGCAGGGGCTAAGAAGGTTCTGATCACTGCCCCTGGAAAAGGGGATATCCCAACTTATGTGGTTGGTGTTAATGCTGATGGTTACACCCATGATGATGACATCATTAGCAATGCTTCTTGCACCACTAACTGCCTTGCTCCCTTTGTCAAGGTCCTTGATCAGAAATTTGGTATCATCAAGGGTACCATGACTACCACTCATTCCTACACCGGTGACCAAAGGCTTCTTGACGCTAGCCACCGTGACCTAAGGCGTGCAAGAGCAGCAGCCCTCAACATTGTCCCAACTTCAACCGGAGCAGCAAAGGCAGTGGCCCTTGTCCTCCCATCACTCAAAGGAAAACTCAACGGTATTGCGCTTCGTGTGCCAACACCAAACGTTTCCGTGGTGGACCTTGTCGTTCAAGTCACAAAGAAGACGTTCGCTGAAGAAGTGAACGAGGCATTCAGAGACAGTGCAGCTAAGGAGCTGAATGGTATTCTCTCAGTTTGTGATGAACCACTTGTGTCTGTAGATTTTAGGTGCACCGATGTGTCCTCAACCGTCGATTCGTCATTGACAATGGTCATGGGAGATGACATGGTGAAGGTTATTGCTTGGTATGACAATGAGTGGGGTTACTCACAAAGAGTTGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGA 1224 0.4534 MASATFSVAKPAIKANGKCFSSEFNGLRNSSGYLHLSSKTSDEFHSVVSFQTNAVGGSSGGYKKALVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGNDGISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADGYTHDDDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKTFAEEVNEAFRDSAAKELNGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02749 407 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 74 397 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Trre13g02749 407 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 72 407 IPR020831 GO:0016620
Trre13g02749 407 Gene3D Dihydrodipicolinate Reductase; domain 2 223 387 - -
Trre13g02749 407 SMART gp_dh_n_7 73 224 IPR020828 GO:0051287
Trre13g02749 407 FunFam Glyceraldehyde-3-phosphate dehydrogenase 73 231 - -
Trre13g02749 407 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 229 385 IPR020829 GO:0016620
Trre13g02749 407 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 224 386 - -
Trre13g02749 407 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 74 175 IPR020828 GO:0051287
Trre13g02749 407 FunFam Glyceraldehyde-3-phosphate dehydrogenase 223 387 - -
Trre13g02749 407 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 222 229 IPR020830 GO:0016620
Trre13g02749 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 240 IPR036291 -
Trre13g02749 407 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 218 236 IPR020831 GO:0016620
Trre13g02749 407 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 245 261 IPR020831 GO:0016620
Trre13g02749 407 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 182 195 IPR020831 GO:0016620
Trre13g02749 407 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 301 318 IPR020831 GO:0016620
Trre13g02749 407 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 341 356 IPR020831 GO:0016620
Trre13g02749 407 Gene3D - 74 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02749 Trre-Chr13 26388722 26391658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02749 K05298 - rcu:8273055 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02749 13 26388722 26391658 Trre13g02749 13 26388722 26391658 ECH