Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02745 ATGTTATCACAAGGTGTATTGGATCCAATTCTCTGTTCAACTCCATCATCATCACTGAACAACAACAACAACAAACCGTTCTCTTCTTCTTCTCTTTTCTGTTGCAATAGCATCATCAATTATAGAAATAGAAGAAGAAGTTTTTCTATGGCTTCAAATCATAGAACAAACAATTTTCTACGCCATATGGAATCAATGAAGATTCTTCCATCTGGTGCTGGTTGCATTCCTCATTTGAATGCTGTTATTCTCGGTGAATCTCTCGCTACTGAAGAAAATGATTTTGTTCTTCCAAGCGAAGAATTTGCTTCCCAAGCAAATGTTCAGTCTCCAGAACAGTATATGAAGATGTATAAGAGATCAATTGAGGATCCTGCTGGATTTTGGTCTGAAATAGCATCAGAGTTCTATTGGAAACAAAAATGGGGTGATCAAGTTTGTAATGAAAATTTTGATGTTAGGAAAGGAAATATCAACATTGAGTGGTTCAAGGGTGGAATCACCAACATATGTTATAATTGTTTGGATAGAAATGTTGAAGCTGGACTTGGTGATAAAGTAGCCTTTTATTGGGAAGGGAATGAACTCGGCGTTGATGCTACTTTAACATACACTCAGCTTCTACATCAAGTTTGTCAGGTTGCAAACTACCTAAAAGATATTGGTGTGAAAAAGGGAGATGCAGTGATTATTTATTTGCCTATGCTTATGGAGCTTCCTATCACAATGCTTGCTTGTGCCCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTTCAGAATCTCTTTCACAGAGAATCATTGATTGTAAGCCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAAGTTATCTATCTGAAAGACATAGTTGATACTGCCATCAATGATTCAACTCAAAATGGGGTCTCTATAGATGTATGCCTAACTTATGATAACACACTTGCATTGAAGAGGGAGGATACTAAATGGACGGAAGGGCGAGATATATGGTGGCAGGATGTCGTTCCTCGATATCCAACTACTTGTCCAGTGGAGTGGCTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACCGGAAAACCTAAGGGTGTCGTCCATACAACCGGAGGTTACATGGTATACACTGCAACGACGTTTAAGTACGCATTTGATTACAAGCCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTACGTCACTTATGGACCCATACTCAATGGTGCAACTGTTGTCCTATATGAAGGGGCTCCCAATTATCCTGATGCTGGGCGTAGTTGGAACATTGTTGACAAATATAAAGTATCAATATTCTACACAGCCCCTACATTGGTGCGGTCTCTCATGCGTGATGGTGACGAGCATGTAACCCGTTACTCGAGGAAATCTTTACGAGTCTTGGGAAGTGTAGGGGAGCCTATAAATCCAAGTGCATGGAGATGGTTTTACAATGTGATTGGAGATTCAAGATGCCCTATCTCTGATACTTGGTGGCAAACGGAAACTGGTGGTTTCATGATAACTCCACTACCTGGTGCTTGGCCCCAGAAACCTGGTTCTGCCACTTGCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAGGGTGTTGAGATCGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAGAGTTCATGGCCGGGAGCATTCAGAACTTTGTATGGTGATCATGAACGATACGAAACAACATATTTCAAGCCCTTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACTATTGGCTTACCGGAAGAGTTGACGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTCTAGTTTCACATCCAAAATGTGCCGAAGCTGCTGTTGTAGGTGTGGAGCACGAGGTTAAAGGACAAAGTATATATGCTTTTGTTACTCTCGTGGACGGTGTTCCATACAGTGAGGAACTGCGGAAGGATCTCGTACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCCGACAAAATCCATTGGGCACCTGGCCTCCCAAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTTAGAAAAATTGCATCAAGGCAGTTAGATGAACTCGGAGATACAAGTACCCTTGCAGAGCCAAATGTGGTTAACCAACTTATTGAACTTGCTGATTCATGA 2244 0.4198 MLSQGVLDPILCSTPSSSLNNNNNKPFSSSSLFCCNSIINYRNRRRSFSMASNHRTNNFLRHMESMKILPSGAGCIPHLNAVILGESLATEENDFVLPSEEFASQANVQSPEQYMKMYKRSIEDPAGFWSEIASEFYWKQKWGDQVCNENFDVRKGNINIEWFKGGITNICYNCLDRNVEAGLGDKVAFYWEGNELGVDATLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSSESLSQRIIDCKPKVVITCNAVKRGSKVIYLKDIVDTAINDSTQNGVSIDVCLTYDNTLALKREDTKWTEGRDIWWQDVVPRYPTTCPVEWLDAEDPLFLLYTSGSTGKPKGVVHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPILNGATVVLYEGAPNYPDAGRSWNIVDKYKVSIFYTAPTLVRSLMRDGDEHVTRYSRKSLRVLGSVGEPINPSAWRWFYNVIGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATCPFFGVQPVIVDEKGVEIEGECSGYLCVKSSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHEVKGQSIYAFVTLVDGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLAEPNVVNQLIELADS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02745 747 PANTHER ACETYL-COENZYME A SYNTHETASE 98 743 - -
Trre13g02745 747 Gene3D - 618 747 IPR045851 -
Trre13g02745 747 ProSitePatterns Putative AMP-binding domain signature. 361 372 IPR020845 -
Trre13g02745 747 Pfam AMP-binding enzyme C-terminal domain 631 709 IPR025110 -
Trre13g02745 747 SUPERFAMILY Acetyl-CoA synthetase-like 100 742 - -
Trre13g02745 747 CDD ACS 112 734 - -
Trre13g02745 747 Hamap Acetyl-coenzyme A synthetase [acs]. 91 745 IPR011904 GO:0003987|GO:0016208|GO:0019427
Trre13g02745 747 NCBIfam acetate--CoA ligase 109 743 IPR011904 GO:0003987|GO:0016208|GO:0019427
Trre13g02745 747 Pfam AMP-binding enzyme 183 622 IPR000873 -
Trre13g02745 747 Gene3D - 94 617 IPR042099 -
Trre13g02745 747 Pfam Acetyl-coenzyme A synthetase N-terminus 114 174 IPR032387 -
Trre13g02745 747 FunFam Acetyl-coenzyme A synthetase 95 617 - -
Trre13g02745 747 FunFam Acetyl-coenzyme A synthetase 618 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02745 Trre-Chr13 26308762 26315584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02745 56 746 Acyl Lipid Metabolism Gene Families AT5G36880 83.647 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02745 K01895 - gmx:100789257 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02745 13 26308762 26315584 Trre13g02745 13 26308762 26315584 ECH