Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02692 ATGACTCCAATTATTAAGGATATCGTAGATACTAGATCCCGTTTCCCCTTTACTTACTCTGAGATTACAACAACCCTATTGTGTGCTCTTCAATCCTTCATTTCAATTTCGCTGAGCTGTGAACGTGTTCATTCCCGATTCTCCCTTCGTTCGCGTCACTTCTCTTTGCGATTCCGCTTTGGAAGTTCAAACTATTTTGATCAAGATCCAACTATTGTCTGTGAGGCCATCTCATGGGTTCTTATTTACCGCACCAATTCTTACAAGAACCTTCGGTCCTCCATCGACAAAGCCTCCAAGAAACTCGAGACTATGAAGACAGACAGCAACAAAATCAACATTAAGAAGTCCAAGACCAAAAAAATTGACCGTGTTGAGACAAGCCTCAAAGAATCTAGTCGTGACTTGTCCCTCTTCAAGTTCAAATCCGGTGGTGTCGTTGCTCTGGTTCTCTTTGTGGTCTTTGGATTGCTAAATTCGCTCTTCGAAGGCAAGGTAGTTGCCAAATTGCCGTTCAAGCCTTTTGGGATTGTTATGAAGATGAGTCATCGAGGGTTGCAAGGTAATGATCCCACAGATTGTTCTATGGCATTTCTATACTTCTTGTGTTCCATTAGTATCAGAACAAATCTGCAGAAGTTCTTGGGTTTTGCACCTCCAAGGGGTTCAGGTGCTGGTCTCTTCCCAATGCCAGACCCAAAGACCAGTTGA 711 0.4318 MTPIIKDIVDTRSRFPFTYSEITTTLLCALQSFISISLSCERVHSRFSLRSRHFSLRFRFGSSNYFDQDPTIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGIVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGSGAGLFPMPDPKTS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02692 236 Pfam Integral membrane protein EMC3/TMCO1-like 73 218 IPR002809 GO:0016020
Trre13g02692 236 Coils Coil 88 108 - -
Trre13g02692 236 PANTHER PNAS-RELATED 71 235 IPR008559 GO:0005262|GO:0005789|GO:0032469
Trre13g02692 236 SMART DUF106_2 69 219 IPR002809 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02692 Trre-Chr13 25469235 25471815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02692 K21891 - gmx:100782593 295.434