Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02663 ATGGAAAAAAATTTGATCTTGAGAATGGTGGTGGGTCTATTGGGTTGTTTTTGTTGTTATGTGGAAGGGCTTGGTGTTAACTGGGGAACACAAGCAACTCACAAATTGCCACCAGAAACTGTTGTTCAGATGTTGAAGGATAATGGGATTCAAAAAGTTAAGCTTTTTGATGCTGATGATACAACAATGAGTGCTTTAGCTGGTAGTGGAATTGAAGTTATGGTTGCAATCCCTAATAATCAACTTGCTGATATGAATGATTACAAGCGTGCTCAATATTGGGTTAGGAAGAATGTTACTCGTTATAACTTTGATGGAGGAGTTAAGATTAAATATGTAGCAGTTGGGAATGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAACATCACACTGCCGGCACTGCAGAACATTCAAAATGCCATTAATGAAGCTGGTCTTGGCGACACTGTAAAAGCAACAGTGCCCTTAAATGCGGACGTGTATATGTCTCCACAAGACCATCCTGTTCCATCTGCAGGAATATTTAGGCCGGATATCAATGGTCTCATGACTCAGATGGTAGCATTTCTCAACAAGAACGGTGCACCATTTACCGTCAACATTTACCCCTTCTTAAGTCTTTACGGAAACGACGACTTTCCTTTCAATTTTGCCTTCTTTGACGGAGCAGACAACCCGTTAAACGATAACGGAATCCTATACACCAATGTCTTTGACGCAAATTTTGATACATTGGTTTCTGCTCTCAAATCAGTCGGTTTTGGCGACACACCAATTTTGGTAGGAGAAGTAGGATGGCCTACAGAAGGAGACAAGAATGCCAATACCAACGATGCATTAAGATTCTACAACGGCCTTCTTTCAAGGCTCGCAGCAAACAAAGGAACACCTCTTCGCCCTGGATTCATTGAAGTTTATCTGTTCGGACTCATAGACGAGGACGCAAAGAGCATCGCACCAGGGAACTTTGAGAGACACTGGGGAATATTTCGATACGACGGACAACCAAAGTTTCCAATGGATCTTACGGGTCAAGGTTCAAACAAACTTCTAATAGGTGCACAAAATGTAAAGTATCTTGATTCAATGTGGTGCATGTTTAACCCTGATGCTAAAGATCTCAGCAAACTTGCTGATAACATTAATTTTGCTTGCACCTTCGGAGATTGCACTGCACTTGGGTATGGATCTTCCTGCAACAGCCTTGATGCTAATGGAAATGCTTCTTATGCATTCAACATGTACTATCAAACGCAGAATCAGAATCGTCAAGCATGCAATTTCGAAGGTTTAGCTAAGCTTACAACTGACAACATTTCAACACCTACATGCAATTTCCCCATTCAGATTGTTCCTTCTGCAGCATCTTCTTTGATGCCTTCATTTGCTGTTTTGTTGTTTATTGCTTTTTCAATGATTCTCTTGGCTTAG 1437 0.4078 MEKNLILRMVVGLLGCFCCYVEGLGVNWGTQATHKLPPETVVQMLKDNGIQKVKLFDADDTTMSALAGSGIEVMVAIPNNQLADMNDYKRAQYWVRKNVTRYNFDGGVKIKYVAVGNEPFLKSYNNSFLNITLPALQNIQNAINEAGLGDTVKATVPLNADVYMSPQDHPVPSAGIFRPDINGLMTQMVAFLNKNGAPFTVNIYPFLSLYGNDDFPFNFAFFDGADNPLNDNGILYTNVFDANFDTLVSALKSVGFGDTPILVGEVGWPTEGDKNANTNDALRFYNGLLSRLAANKGTPLRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLTGQGSNKLLIGAQNVKYLDSMWCMFNPDAKDLSKLADNINFACTFGDCTALGYGSSCNSLDANGNASYAFNMYYQTQNQNRQACNFEGLAKLTTDNISTPTCNFPIQIVPSAASSLMPSFAVLLFIAFSMILLA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02663 478 Gene3D - 360 458 - -
Trre13g02663 478 FunFam Glucan endo-1,3-beta-glucosidase 8 361 457 - -
Trre13g02663 478 Gene3D Glycosidases 23 351 - -
Trre13g02663 478 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Trre13g02663 478 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Trre13g02663 478 FunFam Glucan endo-1,3-beta-glucosidase 5 23 350 - -
Trre13g02663 478 SMART X8_cls 365 448 IPR012946 -
Trre13g02663 478 Pfam X8 domain 366 434 IPR012946 -
Trre13g02663 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 437 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02663 Trre-Chr13 24965636 24968160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02663 6 453 Miscellaneous Gene Families AT1G64760 75.610 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02663 - - gmx:100815300 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02663 13 24965636 24968160 Trre13g02663 13 24965636 24968160 ECH