Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02652 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAATTAAACTTAATAAAAGCCTCTTCAGCTGCTACTACAACTACTACTACAACAACTCCTGAGTCACTCAATGAGAAATATGGAAGAAAAGGTATTAAATTCTTGGAGTCTAATAGCATTCCCATTGTTGAGTTGACTGTTAGAAATGGAAGTTCATTGAGCTTAAGATTACCTGATGCTCATGTTACATCTTACAAACCAAAAGTGTTTTGGAAAGATGATGGATGTGAGGAATTTCTTTACACTATTCCTGCCAATGAAACTGGTCTTTATAAAGCTAAAGGTGGAATTGGTTTGGTTTTTAATGAAGTGCTACAACCTGGTGCAAAAGAGTTGTTTCCTTCTACTTTAGAATGGACTGTTAATGATGTTGATTATGATTCCATTGATGCTCTCCAGGTTGAATTGATCAGCACCAATAGATTTTTTGACATCACTTACATTGTGTCCCTATATCCTGTGAGCATGGCAACAGCAGTTATAGTTAAAAACAAAGCTCCAAAACCAGTAACTCTAACCAATGCTATACTAAGCCATTTTAGATTTAAGAGAAGAGGTGGAGCTGCTATTAAAGGTCTTCAAACTTGTTCATACTCCTCATTCACTCCTCCTGTTTCACCTTTTCAAATCTTGACTCCATCCGAAGCGATTAAATCCGAGTCTCCTAGATTGATTTCATTTGGTGCCGAGCCTGAAGTGAAGCAAGGTTCATGGACTAAACAAGGTGTTCCTATTACTCTCCTTGAGAATAAGATGAGTAGAGTTTTCGCTGCACCTCCAGAAGAAAGATCAAAGGCTTTTTATAACACACTACCTTCAAAATATGAAGTCATCGATCAGGGACGCGAGATTTTCTACCGGGTGATAAGAATGGGATTTGAGGATATTTATGTGTCAAGTCCTGGTTCCATGTCAGAGAAATACGGAAACGACTATTTTGTATGCACCGGTCCTGCTTCATTATTGGTGCCTGTGACTGTGAATCCTGGTGAAGAATGGAGAGGAGCACAGGTTATTGAGCATGATAATCTCTCATAA 1068 0.3839 MASFLSLSLPKLNLIKASSAATTTTTTTTPESLNEKYGRKGIKFLESNSIPIVELTVRNGSSLSLRLPDAHVTSYKPKVFWKDDGCEEFLYTIPANETGLYKAKGGIGLVFNEVLQPGAKELFPSTLEWTVNDVDYDSIDALQVELISTNRFFDITYIVSLYPVSMATAVIVKNKAPKPVTLTNAILSHFRFKRRGGAAIKGLQTCSYSSFTPPVSPFQILTPSEAIKSESPRLISFGAEPEVKQGSWTKQGVPITLLENKMSRVFAAPPEERSKAFYNTLPSKYEVIDQGREIFYRVIRMGFEDIYVSSPGSMSEKYGNDYFVCTGPASLLVPVTVNPGEEWRGAQVIEHDNLS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02652 355 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 48 350 - -
Trre13g02652 355 SUPERFAMILY Galactose mutarotase-like 42 349 IPR011013 GO:0003824|GO:0005975|GO:0030246
Trre13g02652 355 Gene3D - 48 355 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02652 Trre-Chr13 24875956 24877766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02652 - - gmx:100788455 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02652 13 24875956 24877766 Trre13g02652 13 24875956 24877766 ECH
Trre13g02652 13 24875956 24877766 Trre3g03536 3 45703340 45705674 PCT