Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02651 ATGGCAGCTGTTGCTCCTTCATCTGACAAAGCTGCAAGTTTACTGCAGAATTTGACCCTGGATTCACAGCCCAAGACTATTGTTGGAGATGCTGAGCCTGTCAAGAAGAATGGATCTGTTTTTTCCAATGGTACAGCTAAGGGGGCGGGCAAGCCATTCAATCCGAATCCAAATTTTGTTCCTAATGGATATCCTTCGACTACATATTATTATGGAGGTTATGATGGGCAAGGAGATTGGAGTGCTTATCCCAATTATTTGAACCTTGATGGAGGGATGGCTCAAAGTGTGTATGGGGATAACTGCTCTTATATGTATCATCAAGGTTATGGCTACCCACCATATGGAGCATATACTTCGCCGAATTCCTCCTCTCCAATAGTTCAACCTGATGGTCAGATGTATGGCCTGCAACAGTATCAGTATCCTTGTTCTTATTACAACTCTCCAACTTCTGCTGATGGATCATTTGCTTCGAACAAAACCAGTGTTCCACAACGAGAAATGTCAACTGCTGTTAATGCGGATCGCACTCCTTCAAATGTTATGAATAAAGGAAACTCTGTTAGCATGGTCAATGGTGATTGTATAAACCAAAATGGGTTAAAGGCGTTTATATCAAGTTCCCAGCACACATCCTTGAATACAAGGGATTCTTATCAAGGGTCTAGCTTGCCAGCTTGTGCTCCATTGTCAGGACATCAGGGTCCAAGATTGAGTACTCATGGTACACAATCAGCAATTGCTACAGATGTGCCATTGGTGTCTGATAAACAGTTCAAACATGGAGGAAAGGTTGGTTTATCTTCACAAGCGGCACATGTCAAAGATTTCTCATCTCAAAGGAATCAACGACACTCTCAGCCACTTCCACAATTCATGAACTTGAATGGTTCCAGGTATCCATCTGGAATGGAACTAGTTCCCGGATTCATGAACGGGATTTATCCAAGCAACAGTATGTTCAGCCAATATGGAAACACATTCAGAGCAAATTCTCGTTATGGGTCTTCTGTATATGGATCTAGAACAGGTTCTTTTGATAGCAAGTATAGATCCACAGGTAATGGCTATTTTGCTAATGATTCCAGAAAAAATGTGGACGGTTTCAGTGAGCTAAACAAGGGACCAAGAGGTGGTGCCAAGAGTTACGATAATAAAAGTGTCAAAAGTCTTGGAGCTGTCACATTATTACTCAAAGGACAGAACCTTACTGTGAAGAGTGATGACAAAGAAGTAGTGCCTCTTGTTGTTCCAAGTAAAGAACAATACAATGGAGAAGATTTGTCTGAGAATTATTCTGATGCTAAGTTTTTTATCATCAAATCCTACAGCGAGGACGATGTTCACAAGAGCATAAAATATAATGTTTGGGCAAGTACTCCCAATGGCAACAAAAAGCTGGATGCGGCATACCAGGAAGCCAAGGAGAAGCCTGGTGGCTGTCCTATATTTTTGTTATTTTCGGTCAACACTAGTGGTCAATTTGTTGGTTTAGCCGAGATGACTGGTCCGGTTGATTTCGATAAATCTGTAGAGTATTGGCAGCAGGACAGGTGGACCGGTTGCTTTAATGTGAAGTGGCATGTCATTAAGGATATTCCAAATGGCGTGTTAAGGCACATAACACTAGAAAACAACGAAAACAAACCTGTAACTAATAGCAGGGATACTCAGGAGGTTAAGTTTGATAAGGGTATTCAAATTGTCAAAATTTTCAAAGAGCATTCAAGCAAAACAAGCATATTGGATGATTTTGGCTTTTATGAGTCCCGTGAAGAGACCACTCAGGAGAGAAAATATAAAGAGCAGCAGTTACCAAAACAGGTGAACAAGGCCAGTGATATAACATTTGGCTCAGTTACATTACCAAAGTCTCTTGAATCAGCTACTGCAGAAGCAGCACAAGGAAAGTTGAATTCAGAGGTGCTATTAGAAAGGAATGGATCCACCCCAGCATTTGAAGATTCTTCTAAGAGCAGTTAG 1986 0.4119 MAAVAPSSDKAASLLQNLTLDSQPKTIVGDAEPVKKNGSVFSNGTAKGAGKPFNPNPNFVPNGYPSTTYYYGGYDGQGDWSAYPNYLNLDGGMAQSVYGDNCSYMYHQGYGYPPYGAYTSPNSSSPIVQPDGQMYGLQQYQYPCSYYNSPTSADGSFASNKTSVPQREMSTAVNADRTPSNVMNKGNSVSMVNGDCINQNGLKAFISSSQHTSLNTRDSYQGSSLPACAPLSGHQGPRLSTHGTQSAIATDVPLVSDKQFKHGGKVGLSSQAAHVKDFSSQRNQRHSQPLPQFMNLNGSRYPSGMELVPGFMNGIYPSNSMFSQYGNTFRANSRYGSSVYGSRTGSFDSKYRSTGNGYFANDSRKNVDGFSELNKGPRGGAKSYDNKSVKSLGAVTLLLKGQNLTVKSDDKEVVPLVVPSKEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMTGPVDFDKSVEYWQQDRWTGCFNVKWHVIKDIPNGVLRHITLENNENKPVTNSRDTQEVKFDKGIQIVKIFKEHSSKTSILDDFGFYESREETTQERKYKEQQLPKQVNKASDITFGSVTLPKSLESATAEAAQGKLNSEVLLERNGSTPAFEDSSKSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02651 661 CDD YTH 437 573 IPR007275 GO:0003723
Trre13g02651 661 Pfam YT521-B-like domain 436 574 IPR007275 GO:0003723
Trre13g02651 661 MobiDBLite consensus disorder prediction 643 661 - -
Trre13g02651 661 Gene3D ph1033 like domains 418 587 - -
Trre13g02651 661 ProSiteProfiles YTH domain profile. 436 573 IPR007275 GO:0003723
Trre13g02651 661 FunFam YTH domain family 1, isoform CRA_a 416 588 - -
Trre13g02651 661 MobiDBLite consensus disorder prediction 641 661 - -
Trre13g02651 661 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 80 622 IPR045168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02651 Trre-Chr13 24870444 24874969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02651 - K20102 gmx:100818027 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02651 13 24870444 24874969 Trre13g02651 13 24870444 24874969 ECH