Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02633 ATGGTGACGCCATTGACAAGAGTCTCCACATTTTTTCGCCCAAATTCCCATAATGCCCTTCCTTTCTCCCCCAAACCACGCAACACTTCATTACCAAACTCCTTCACCTTCACTTCTCCCACTCCCTCTCTTTCAATGGCTGCTTCTTCCCAATCCACTGCTCCGGTTGCGTCATCTGGTGATGTTAACATAAAAAAAGACGATGTTTTTCAGTTAATTCAAGCTCATCAGGAAAAAGCTGCTAGACTTCCACCAATTGAAGAAATTCGAACTGTCCTTGATCGGAGTGTGCGTGGTACGCTTTCCACATTCTCGAAGAAGTATGACGGTTATCCATCAGGATCTATGGTTGACTTTGCATGTGATGCAAATGGATGTCCTATATTAGCAGTGAGCGACTTGGCAGTTCATTCGAAGGACTTAGCTGCTAATCCTAAATGTTCAGTGCTTCTGGCTAGAGATCCTGAAGATAGGACTGATTTGGTGATCACTTTACATGGTGACGCTGTCTTTGTACCTGAAAAGGATAATAAGGCCATACGAGCTGCATATTTGGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCGATTTGTACGCATTGAACCAAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGAGTTTAATGGAGACGAGTACAAATCTGCAAAAGTTGATCCCATAGCTCAGTTTTCCAAGCCAGTAGCGTCGCATATGAACAAAGATCATGGTGAAGATACTAAAGCGATTGTGCAGCACTGGACCTCAGTTCCGGTGGACTTTGCTGACATACTAGATTTGGATCGTCTAGGATTCAATGTTAAGGCTGGTTATCAAGGAGACACTTTCAAGCTCCGTGTACCTTTTCCTCGTCCTGCAGAAGATAGAAAGGATGTTAAGACTCTCATTGTTGAGATGCTCCAAGCTGCTAGGCCTCAAGCTTGA 975 0.441 MVTPLTRVSTFFRPNSHNALPFSPKPRNTSLPNSFTFTSPTPSLSMAASSQSTAPVASSGDVNIKKDDVFQLIQAHQEKAARLPPIEEIRTVLDRSVRGTLSTFSKKYDGYPSGSMVDFACDANGCPILAVSDLAVHSKDLAANPKCSVLLARDPEDRTDLVITLHGDAVFVPEKDNKAIRAAYLARHPNAFWVDFGDFRFVRIEPKVVRFVSGVATALLGSGEFNGDEYKSAKVDPIAQFSKPVASHMNKDHGEDTKAIVQHWTSVPVDFADILDLDRLGFNVKAGYQGDTFKLRVPFPRPAEDRKDVKTLIVEMLQAARPQA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02633 324 Pfam Pyridoxamine 5'-phosphate oxidase 90 213 - -
Trre13g02633 324 PANTHER CREG1 PROTEIN 28 320 - -
Trre13g02633 324 SUPERFAMILY FMN-binding split barrel 86 321 - -
Trre13g02633 324 Gene3D - 66 220 IPR012349 -
Trre13g02633 324 Gene3D - 235 324 IPR037119 -
Trre13g02633 324 Pfam Domain of unknown function (DUF2470) 243 316 IPR019595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02633 Trre-Chr13 24653758 24657785 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02633 - - gmx:100792427 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02633 13 24653758 24657785 Trre13g02633 13 24653758 24657785 ECH