Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02595 ATGGCTTCTTCTCATGCTGTTTTTATTGCATTTTCCATGGTTTTGTTTTCCTCAGTTTCAATGGCAACTGATCATATTGTGGGAGATGACAAGGGCTGGACTGTTGATTTCAATTACACTCAATGGGCTCAGGAGATGGTTTTTCGTGTTGGTGACAATCTTGTTTTCAACTATGACCCTTCAAGACACAATGTTTTCAAAGTGAATGGAACACAATTTCAAAGCTGCACTTTTCCACCATCAAATGAAGCACTTTCCACCGGAAAAGATACTATTCAACTAAAATCTGAAGGCAAAAAGTGGTATGTATGTGGCATAGGTAATCACTGTTCTGCTCGTCAAATGAAGTTTGTTATCACTGTTTTACCGGAAAGTGCACCGACTCCTTCTCCTCCGCCTTCTTCGGCAGCTCACTCTATCGTATCATCTGTGGTTGGAGTCGTCATGATAACCATGGTTGGTATTGCAGCCATATTTGTATGA 483 0.4079 MASSHAVFIAFSMVLFSSVSMATDHIVGDDKGWTVDFNYTQWAQEMVFRVGDNLVFNYDPSRHNVFKVNGTQFQSCTFPPSNEALSTGKDTIQLKSEGKKWYVCGIGNHCSARQMKFVITVLPESAPTPSPPPSSAAHSIVSSVVGVVMITMVGIAAIFV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02595 160 SUPERFAMILY Cupredoxins 21 122 IPR008972 -
Trre13g02595 160 CDD Phytocyanin 23 121 - -
Trre13g02595 160 Gene3D - 21 127 IPR008972 -
Trre13g02595 160 FunFam Cupredoxin superfamily protein 21 126 - -
Trre13g02595 160 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Trre13g02595 160 PANTHER BLUE COPPER PROTEIN 21 133 IPR039391 GO:0009055
Trre13g02595 160 Pfam Plastocyanin-like domain 33 112 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02595 Trre-Chr13 23999613 24000587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02595 19 132 Miscellaneous Gene Families AT2G32300 35.965 8.08e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02595 - - psat:127129120 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02595 13 23999613 24000587 Trre13g02595 13 23999613 24000587 ECH