Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02590 ATGGGTGAACAAACCGTAGAAAAATCACGCCGAGAACGAAGGAAAGAATCCCGTTTGGCGAAGAAAACATCCAAACACCAATCTTGGCTTCAACGCCAGAAATCTGAATCTATTAAAAGAAGTACCAATCAAGATCCAGTGTTAAAATCTGAAAGCAAATTGGACCAATCAGTTATTCCTAGTCTCCATGAAACACAAGTTGTGAAAAAATTGAAATCGTCGTCTGAGAAACAAGTGGCAGCTGAAGAACGTGCGTTGTCAGAAGATGAAACTTGTGGCCCTGTTGTAAGGAAAGTGAAGAAGAGTTCTAAAACAAGTTCCAAGAAGAAGAAGGTTGAGATGGGTGTGTCGGAGATGTCATTCGCTGCCCAAAAGGATTTAGAGTTGGAAAGAAAACTCTCCAAGAGGCTTAAGGTGAAAGAAGGAAAATTGGGGGGATTGGATGATGGATTGAACATGTTATTTGAAGGATTGCCTTCTGGTGATGATTTATTTGGAGATAAGGAGGTTCTTGATACTGATGAATTACCAAAAAGGAAGTCAAAGAAGAGCTCGTCGAGTAAGAAGCAGAAGTTGTCAAAGAAAGGGGTGGAAGCAGAGTCATTATATGCCGCATCGGGACCTTTGGAAGCTTCTAATCAAGATGTAGCATTTGAAGAAGTTCCCGATAGTGAAACTTCCAGGAAGAAGAATAAGAAAAGAAAGTTGGTGAATCATGAGCAAGAAGATGGTGTGGGGGATGGTGATGTTTGCATAGTCAAACCTGTGAAATCCTGTGGAACAGATGCGACATCAGGGGATGTTGCTGCTGAAGTTTCTGAGAAGAAAGAGAAAGGAAAATATATAGCGCCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAGGAGCATACTCAAATTCGAAGACGTGTACGAGGCCTTCTTAACAGGATTTCTGAATCAAATGTTGAGTCAATTACTGGAGAATTGTCCTTGATTTTTCAGTCTGTTCCTCGTAGCGTTGCTTCACAGATTATGATTGAGGAGACTTTAGCATCATGTTCTGGTGGGCCCCGTGGCAATAAACAATATGCTGCTGTGTTTGGTGCATTTGTTGCAGGGATGGCCTGCTTGGTTGGTATTGACTTCGGTGCAAAGTTTATGGCTTCCTTTGCCAAATGCTTTGAGGATGAGTATCATAAACAAGACAATCTCTCCTTGCGGAATATTGCTCTTCTCTTATCCTATTTATGTATATTTGGTGTCTGTTCTAGTGATTTAATATTTGACTTTCTAATCATGCTGAGCAAGCGTTTGACCGAGGTGGATGTCTCTATTATTTTGACTGTGTTACAAAGTTGTGGGATGAAAATAAGGGCGGATGATCCAACTGCCATGAAAACATTCATTCTTAATGTTCAGGATACGTCAAATAAGTTGAAGTCTTCCTCTGGAGATGTTCCTGAAAAGAATAACAGCAAAAGAATGGAGTTCATGCTTGAAACCATATATGATATCAAGAACAACAAGAAAAAGACAGAAGAGGTTAACCCTCGAATTAAAAAGTGGCTACAGAAGTTAAGAGTTGATGATATTTCAATTAGAGGGCTTACATGGAGTAAGTTACTTGATCCCGACAAGAAGGGCCAATGGTGGTTGTCTGGAGATGTGGTTTCTGCTACAGATAATATTGAAAATATTGAAAACGTGGCTAACAAAATAGACAAAGATGTTGCTGAAACCCAACGAATGCTGCAGCTTGCTGCTGCTCAAAGGATGAACACAGATTCCAGAAGGGCAATATTTTGTATTATAATGTCTGGGGAGGATTACATTGATGCATTTGAAAAGCTTCTAAGATTGGAACTTCCAGGCAAGCAGGACAGAGATATAATGCGGGTTCTTGTTGAGTGTTGCTTGCAAGAGAAGGTTTTTAACAAGTATTATACGGTGCTGGCTTCCAAATTGTGTGAGCATGACAAAAATCACAAGTTTACTCTGCAGTTTTGCTTATGGGACCACTTTAAGGAGCTGGAGTCTATGGCTCTTTTGAGATCAATGCACTTGGCAAAGTTTGTGGCTGAAATGGCTGCATCTTTTACACTCTCCCTTACAGTTTTGAAGACTGTAGATCTAAGTGATATCACCCAGCTAACCCCAAAAAGGATTATGCATTTCCGCATTCTGTTTGAGGCCATTTTCGATTATCCTGACACCGTGGTGTGGAAGATATTCACGCGTATAGCAGGGACCCCTGAACTTGAAAGTTTTAGACAAGGCATTGAGTTTTTCATTAAGGAATACATTTTGAAGACAAATAAAGCTTTATCTCAAAAATTTAAGTTGGCAAAAAGAGCCCTTAATAATATTGAAGGAGTCCTGATGCAAGAGTAA 2373 0.4024 MGEQTVEKSRRERRKESRLAKKTSKHQSWLQRQKSESIKRSTNQDPVLKSESKLDQSVIPSLHETQVVKKLKSSSEKQVAAEERALSEDETCGPVVRKVKKSSKTSSKKKKVEMGVSEMSFAAQKDLELERKLSKRLKVKEGKLGGLDDGLNMLFEGLPSGDDLFGDKEVLDTDELPKRKSKKSSSSKKQKLSKKGVEAESLYAASGPLEASNQDVAFEEVPDSETSRKKNKKRKLVNHEQEDGVGDGDVCIVKPVKSCGTDATSGDVAAEVSEKKEKGKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRISESNVESITGELSLIFQSVPRSVASQIMIEETLASCSGGPRGNKQYAAVFGAFVAGMACLVGIDFGAKFMASFAKCFEDEYHKQDNLSLRNIALLLSYLCIFGVCSSDLIFDFLIMLSKRLTEVDVSIILTVLQSCGMKIRADDPTAMKTFILNVQDTSNKLKSSSGDVPEKNNSKRMEFMLETIYDIKNNKKKTEEVNPRIKKWLQKLRVDDISIRGLTWSKLLDPDKKGQWWLSGDVVSATDNIENIENVANKIDKDVAETQRMLQLAAAQRMNTDSRRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMALLRSMHLAKFVAEMAASFTLSLTVLKTVDLSDITQLTPKRIMHFRILFEAIFDYPDTVVWKIFTRIAGTPELESFRQGIEFFIKEYILKTNKALSQKFKLAKRALNNIEGVLMQE 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02590 790 SMART ma3_7 590 696 IPR003891 -
Trre13g02590 790 MobiDBLite consensus disorder prediction 162 181 - -
Trre13g02590 790 MobiDBLite consensus disorder prediction 1 113 - -
Trre13g02590 790 SUPERFAMILY ARM repeat 294 504 IPR016024 -
Trre13g02590 790 FunFam MIF4G domain-containing protein / MA3 domain-containing protein 268 546 - -
Trre13g02590 790 ProSiteProfiles MI domain profile. 589 705 IPR003891 -
Trre13g02590 790 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 11 783 - -
Trre13g02590 790 Coils Coil 557 577 - -
Trre13g02590 790 MobiDBLite consensus disorder prediction 69 97 - -
Trre13g02590 790 Pfam MA3 domain 591 691 IPR003891 -
Trre13g02590 790 MobiDBLite consensus disorder prediction 160 241 - -
Trre13g02590 790 MobiDBLite consensus disorder prediction 29 63 - -
Trre13g02590 790 SMART if4_15 301 503 IPR003890 GO:0003723|GO:0005515
Trre13g02590 790 Gene3D - 268 570 - -
Trre13g02590 790 MobiDBLite consensus disorder prediction 221 241 - -
Trre13g02590 790 Pfam MIF4G domain 302 503 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02590 Trre-Chr13 23965357 23973107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02590 K17583 - gmx:100778579 1058.51