Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02420 ATGTCGGGCAACAAGGTAGTAATAACCTACAAAAGAAAACGGCATTCTCAAAGTAGAAGTTTCATCAGTGGAAATCGTTGCCAAAACTCGGTTGGTGAAGATGCCCGTAATTGTTCTTTATCAAAACGAGTTAAACACGACAACCAAACTGCTGAGACGACATCAGAAAAACATGAAGAAAAATCAATGGATGCTAGTGATGGGAAAAAGCTGTGCTCTGGAAGCATCAAACAGCCAGATCATTCATTGCCACTTCCCGTTCAAAAGGCAGGTGGGCTCGAAGAAACTGAGTTGATAATTACTACGAAGGAAACACTTTTAACAAGTCATCCATGTGAGGATAATTCGAAGAGGGATGTTGATGACTTAGCCCCAATAAAAGAGGCTTCACAGAATGGTTTTGAATTACCCTCAATAAAAGAGGCTTCAGAGAATGGTTGCGGCACACAGAAAAATTCCTGTGTAGGTGAAAACTCTGGTAATGAATGTGACAACGGTTCTTCTAATAAAAACAATACTTCCCCCTCAGTTGAAAAAGATGCTGCTGAGAATGATATCAATTTAATCAATTCAGAAACATCAGTTACAAGAGAATCCAGTGCTGCATGTGGCGATGAACCTCTTGTTTTGAATAAGTCAACGGATAGATTTACTAAATCACCCTCCAATGATAATTTTGGAAACCAATCTGAAGATAAGGTAACACAGACCAGCTTGACCAGTCCGTTAACAACCTATCGATGTTATAAAAGAAGAAAGTGTATGGATGGGACCAATAAGAAAAGCAATTTGTCGCCCGAGAAGGAAAACATTCCAGTGCTAACCAAGTGGAGCATGCTTGCAAATGCTAATGCTGGTCCCTCTTCTAGTGACGATGAATCATCTTGTGACGAGTGTCCTGCACATAATGTACCAGATCTTAATCAATCAGTGGAGCTTTCCGAAAGAGAGAAGCCACTGGATAAAACTCAAGACGATGCATCTTGTAGAAGCAGTTCTAGGGTTCTTCTAACCGACCTTAATCAATCAGCAGAGCATTCTGAAAGAAGAGAGCTTGATCAGACTCAAGAAAAAGCGAGAATTGCTGACACTTCATGTACTAGTGGAGTTGTTTCTGAAACCTGCGAGACACATATGGGAGAGCAACTGCATCAAGGGGAAGACATAGTGAAAAATGACACTCAAATGGATGGAACAGAAGTTCCAAGCCAGAGTTCTCTGATTCATAAGGAAGCCGAACATCTTGATAAAGATTGCCAAGGAATCTCTATCAATGTTGATTCTATAAATCTCTGTCCTGCTTCCACAACTGCTGACCAAGAAGTAGAAGAGTTCCAACCCTCTGCGAAAGAAGCAATTGAAAATGATCCTTGCAATGACATGAAGAAAAGTGGAGAGCACCAACCTCAGTTTGACCAATCTGCTAAGTCTGCAGAAGAGCAAACTATTGAAGTGAACCTTGGTGCTGACAAGCATTCCCTTCACTTGGGGACGAGAACTCTTGTAGCCAAATCTGACTCTACAAGCAGTAGATCTGCCACTGCTGAGAATCAAGTTACTCCACTGGAATTTTTAAACTCCAGCAATACTAAGGTGATTTCAGAAGGAAAGACCATCGAAGATGTTTGCTCAAGCATTACTCATTCTCAGTCAGGCGGTTGCATGATGTTAGATGAAAGAATGAATGTTCAACAAACTAAAACGAATCAACCAAAACGCATGCCAACCGTATCTCTTTCTTTGGGTTTGTCTCTACCTGTGGAGCATCAGACTGGAGGTTTTGATTCCAGTAATTGTCTGTCTACATTGCCTTTGTTTAATTTAACCGCTGGAACTAAAGATATTGTCCAAGATGGATTATGTCAGTCTTCGAGGAAGCAAAAACCATCGCGTGTCCGGCACAAAGCAGTGCTTGACAACATTGTAAGCAAAGCAAGAGCTTTAAATGAGAGAGGCAAGTTTCAAGAAAATTTCATGCCACACCCTATAATGTGGTCTGAAGAGGAGTTGGATTATCTCTGGATTGGTGTGAGGAGACATGGTAGGGGAAACTGGGATGCTATGCTTAGGGATCCAAGATTGCGGTTTTCACCATTAAGGGCACCATGGGACCTTGCTGAGAGGTGGGAGGAGGAACAATTAAAACTTCTTAAAGATATTAGTGCTCCACAGTTCATGCATCCAAGTGCAGAAAGAGCCGCGGCGTTGCAAGGAAAATATTGCTTCTTAGATCCCAAATTAGGTCTTTGGAGACAAAATACAATGGAGGAGACCAATCTATTCCCTGAAGATGTATTTTCTTATAGGGAGAATAACCCCTTGAAGAAATCTCTTGCTAGGTCATTTCTTCTAAGTAACACCGCTATATGCAGTCCCGCACCAACTACTCATTCCAGGAGAACTTCTTACAACAACATCGATAAGTATGAATTAGGATTTTTCAATTCTCCAGGAAACTTGAGTATTTCCAAGGAAAACTCTTATTCTAATAATCATCCATTTAACTGTTCCTCCGGGAAGAATAATTTGCCACATTGGCTCCGAGAAGCAATCAGTACTCCTCCAATGTCCGTAGAAGCAAATCTGTCGGCAGATCATAGCTTTGATGCCGCCGCTGGTAAGTCATGCTTTCTACCTCAAAATCAGTTGAGTGGTTTGAAGACAAATGATGTACATATGTCAAATGCTTCTCACTATTCAACCTATTCAAGAAGAAAATATGGGATACTAAAAATGAATACGTCTCTGCAACATCATGTCAGCAAACAAGATGACTTGATTGTTATTGATAGCGACACATCTTCCGAGGAGACTATATCGGACGATCATGGTGCCAGCTTGAAGATTTGA 2850 0.4109 MSGNKVVITYKRKRHSQSRSFISGNRCQNSVGEDARNCSLSKRVKHDNQTAETTSEKHEEKSMDASDGKKLCSGSIKQPDHSLPLPVQKAGGLEETELIITTKETLLTSHPCEDNSKRDVDDLAPIKEASQNGFELPSIKEASENGCGTQKNSCVGENSGNECDNGSSNKNNTSPSVEKDAAENDINLINSETSVTRESSAACGDEPLVLNKSTDRFTKSPSNDNFGNQSEDKVTQTSLTSPLTTYRCYKRRKCMDGTNKKSNLSPEKENIPVLTKWSMLANANAGPSSSDDESSCDECPAHNVPDLNQSVELSEREKPLDKTQDDASCRSSSRVLLTDLNQSAEHSERRELDQTQEKARIADTSCTSGVVSETCETHMGEQLHQGEDIVKNDTQMDGTEVPSQSSLIHKEAEHLDKDCQGISINVDSINLCPASTTADQEVEEFQPSAKEAIENDPCNDMKKSGEHQPQFDQSAKSAEEQTIEVNLGADKHSLHLGTRTLVAKSDSTSSRSATAENQVTPLEFLNSSNTKVISEGKTIEDVCSSITHSQSGGCMMLDERMNVQQTKTNQPKRMPTVSLSLGLSLPVEHQTGGFDSSNCLSTLPLFNLTAGTKDIVQDGLCQSSRKQKPSRVRHKAVLDNIVSKARALNERGKFQENFMPHPIMWSEEELDYLWIGVRRHGRGNWDAMLRDPRLRFSPLRAPWDLAERWEEEQLKLLKDISAPQFMHPSAERAAALQGKYCFLDPKLGLWRQNTMEETNLFPEDVFSYRENNPLKKSLARSFLLSNTAICSPAPTTHSRRTSYNNIDKYELGFFNSPGNLSISKENSYSNNHPFNCSSGKNNLPHWLREAISTPPMSVEANLSADHSFDAAAGKSCFLPQNQLSGLKTNDVHMSNASHYSTYSRRKYGILKMNTSLQHHVSKQDDLIVIDSDTSSEETISDDHGASLKI 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02420 949 MobiDBLite consensus disorder prediction 38 67 - -
Trre13g02420 949 SUPERFAMILY Homeodomain-like 663 711 IPR009057 -
Trre13g02420 949 CDD SANT_TRF 663 709 - -
Trre13g02420 949 Gene3D - 630 726 - -
Trre13g02420 949 ProSiteProfiles Myb-like domain profile. 665 713 IPR001005 -
Trre13g02420 949 MobiDBLite consensus disorder prediction 213 241 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 143 200 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 282 361 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 343 358 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 131 241 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 1 87 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 311 328 - -
Trre13g02420 949 MobiDBLite consensus disorder prediction 20 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02420 Trre-Chr13 21724888 21729484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02420 - - tpra:123888194 1677.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02420 13 21724888 21729484 Trre13g02420 13 21724888 21729484 ECH