Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02419 ATGGCGAATAATAATCATCATCACCGTTCCAACTCTTTTTCCAGTGATATTTCAGTTTATTTGGACGCAAACGATCGTTCCATTAATAGCGCTTCTTCTTCAGGACGTATTGATAGGGATTTATCAAGTGTGTCGCAGAATGTGGAAGAATCTGGAGCTGATGGAGTTGTAGATGAAGCTGAACCGGAAAATAAGGGTTACAGTAAGAAAGATGCTGATAAAGTTGTAAAGAACAGTGGATTATTGACTAGATTCTTTGATGAGAATCTTCCCTTCAAGAAAAGGCTGAGATGGCTAAAAAAAGCTTCCATGGTTAAGGATGACGGTACTGTAGAAATTGATGTTCCAGGAAATATTAAACCCCGCTCTCCAGAAAATGGAACCGGGGTTCTTGATCCCAGTGATGAATCTTGCAACGAAACGATCATTGAGGATATTAAACCTATTCGACCACAACAAATTGCAATGCTTATAGTTGGCACACGAGGAGATGTCCAGCCATTTGTTGCCATTGGAAAGCGTTTGCAGGCAGACGGCCACAGGGTTAGGCTTGCTACTCATAAGAATTTTGAAGATTTTGTCTTGAAGGCAGGCTTGGAATTTTACCCTTTAGGAGGAGATCCCAAAGTTCTTGCTGAGTATATGGTTAAGAATAAAGGCTTCTTGCCATCAGGACCTTCAGAAATACATTTACAAAGAAGTCAAATCAAGTCTATTATTCACTCTTTGCTTCCTGCATGCAACAGCCGGTATCCAGAGTCTAATGAACCATTTAAAGCAGAAGCAATAATTGCAAACCCTCCAGCATATGGGCATACTCATGTTGCTGAGTATCTAAATGTTCCGCTGCACATATTCTTCACAATGCCGTGGACGCCTACTAGTGAATTCCCTCATCCTCTTTCCCGTGTTAGGCAGCCAATTGGATACAGACTTTCATATCAAATAGTTGATGCTTTAATCTGGCTTGGAATACGAGATTTGATAAATGAATTTAGGAAGAAGAAGCTGAAGCTAAGAGCTATTACTTATCTACGTGGTTCTTACACTTCCCCTCCTGATATGCCCTATGGTTATATTTGGAGCCCCAACTTGGTCCCGAAACCAAAAGATTGGGGACCTAATATTGACATTGTTGGATTTTGTTTCCTTGACCTTGCTTCAAATTATGAACCGCCAAAATCGCTAGTAGATTGGCTTGAAGAAGGAGAAAACCCTATCTATGTTGGATTTGGTAGCCTTCCTCTACAGGAACCGGATAAAATGACAAGAATTATAGTTGAAGCTCTGAAACAAACAGGGCAGAGAGGTATCATCAACAAAGGGTGGGGTGGTCTTGGGAATTGGGCAGAACTAAATAAATCCAAATCTGTGTACTTATTGGACAACTGTCCGCATGATTGGCTATTTCCAAGATGCACTGCTGTGGTACATCATGGGGGCGCTGGAACAACTGCTGCCGGTCTTAGATCTGAATGCCCAACTACTATTGTACCATTCTTTGGTGACCAGCCATTTTGGGGAGAGAGGGTGCATGCCAGAGGAGTAGGTCCTGCGCCCATCCCAGTAGGCGAGTTTACGTTGGAAAGGCTGGTTGATGCCATACGCTTTATGCTGAATCCAGAGGTGAAAAGGCGTGCTGTTGAACTTGCTAACGCCATGAAAAATGAAGACGGGGTGGTAGGAGCAGTTAATGCTTTCTATAAACATTTTCCAGACCAAAGCACTGATACTGAGGCCGAGCCCATGCTAGTAGCCCCAGTACATAAAAAGTTCTCTATACGAGGATGCTTTGGTTACTAG 1803 0.426 MANNNHHHRSNSFSSDISVYLDANDRSINSASSSGRIDRDLSSVSQNVEESGADGVVDEAEPENKGYSKKDADKVVKNSGLLTRFFDENLPFKKRLRWLKKASMVKDDGTVEIDVPGNIKPRSPENGTGVLDPSDESCNETIIEDIKPIRPQQIAMLIVGTRGDVQPFVAIGKRLQADGHRVRLATHKNFEDFVLKAGLEFYPLGGDPKVLAEYMVKNKGFLPSGPSEIHLQRSQIKSIIHSLLPACNSRYPESNEPFKAEAIIANPPAYGHTHVAEYLNVPLHIFFTMPWTPTSEFPHPLSRVRQPIGYRLSYQIVDALIWLGIRDLINEFRKKKLKLRAITYLRGSYTSPPDMPYGYIWSPNLVPKPKDWGPNIDIVGFCFLDLASNYEPPKSLVDWLEEGENPIYVGFGSLPLQEPDKMTRIIVEALKQTGQRGIINKGWGGLGNWAELNKSKSVYLLDNCPHDWLFPRCTAVVHHGGAGTTAAGLRSECPTTIVPFFGDQPFWGERVHARGVGPAPIPVGEFTLERLVDAIRFMLNPEVKRRAVELANAMKNEDGVVGAVNAFYKHFPDQSTDTEAEPMLVAPVHKKFSIRGCFGY 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02419 600 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 154 569 - -
Trre13g02419 600 MobiDBLite consensus disorder prediction 30 68 - -
Trre13g02419 600 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 78 577 - -
Trre13g02419 600 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 154 384 - -
Trre13g02419 600 CDD GT1_Gtf-like 154 570 IPR002213 GO:0008194
Trre13g02419 600 Gene3D Glycogen Phosphorylase B; 154 559 - -
Trre13g02419 600 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 385 554 - -
Trre13g02419 600 Pfam Glycosyltransferase family 28 N-terminal domain 154 298 IPR004276 GO:0005975|GO:0016758|GO:0030259
Trre13g02419 600 Gene3D Glycogen Phosphorylase B; 383 554 - -
Trre13g02419 600 MobiDBLite consensus disorder prediction 115 135 - -
Trre13g02419 600 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 369 551 IPR002213 GO:0008194
Trre13g02419 600 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02419 Trre-Chr13 21703640 21711327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02419 83 599 Glycosyltransferase AT3G07020 67.686 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02419 K05841 - gmx:100779695 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02419 13 21703640 21711327 Trre13g02419 13 21703640 21711327 ECH