Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02405 ATGGCAACCACGGCGGCGATCCGTTCTCTTCTCCGCCGTTCACGTCCCTCCTCACTCCTCTATCTTCCCCGTGTCCTCACTTCTCATCTCCCTCCTCCACAACCCTCTCCTTTCACACCTCACTCTCCATCCTCCACCATTCTCGACGCGTTCCGCACACGCGCTTTCTCCACCAGCTCTTCCAATGACCGCGATTTCGATACCGACTCGTTCAGTCTCGACTCGACAACTCACTCCGAGATTCTGAAAGCAGTAGCTGACAGCGCCAGTGCCGGCGGCGAAGATATTCCTGCTTTCCCCGTTCGTGTGGTGATTTCAATGCTCGATTCATTCCACGATCTTACTGGATTTCCATGGTGGTTAACTATTGTTTCGTCTACTTTGGCTCTCAGAATTGTTCTTCTTTTTCCTCTTGTTTTTACTCTTCACAAGCTTAAAAGGATTTCAGAGTTTGTACCTAAATTGCCCCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATTTTCGTCAGATGTCATTCTTCGAAGAGAAGAGAAAAGCAGTTGGATGCCCTTCATATGCATGGCCGCTGGTTCCATTTATGATTCAGGTTCCCTGCTTTTTCACGTGGATGTTTAGCATAAGGAGGATGTCACTGGATGGTCACCCTGGTTTTGATTGTGGTGGTGCTTTATGGTTCCAGAATTTAACAGAATTCTCTCACGGTTATTCAGGGTTCACCTTTCCTTTTCTGATGGCCGGTTTGCACTACACTATTGTTCAGGTAACCTTTAAGAAACCTTTGGTTGAAGGAACGAAGGACCTTTTTGACTTGTTATCCACGTACTACAAGCGATACTTGGACTTTCTAACGCTGCCTATTGCTTTCATTGGCTTTTGTATTCCCCAGGGAAGCCAAATTTATTGGATTACCAATAGTACATTAACACTCGTTCAGCACTTTGCCCTTAGAAATCCTGCTACCCTTGCAAAGTTGGGGTTACTTGACAAAAATCATCAAAGAGCAGCTTCTGAGGAAATCGGTGCTTCAAAAACACCCCATTTACTGCGAATACAAGACAATAGTACAACAGCAGCTACCAAGGAAACTGTTTCTCCTGAAAAGAACCCTCTGGATTCACCTGAAAAATGGCATAAAATACCTACAGAGAACATGTCCTCTGTAGAACTGACCACTCTTGCAGTCCCATTTCTAAACAGTAATGATAAAGAAAGTGCAATACCTTTACTTAAACTAGCACTTGATAAGGACCCTGAATACTTGCGAGCTTTGGTTTTGATGGGGCGGGTTCTATTGCTGAAGCAAATAAATGATGAAGCTATTGTGTACTTTGAGCGTGCAATATCTAAGCTCTTACTTGCTGGCCACCCAACTGATCCAGAAGAGGTTGATTTTTTGATTCTTTCATCCCAATGGGCTGGAATTGTTTATGCACGACAGGGAAAGAATGACGAAGCACGTGCTTACTTTGAAAGAGTTGCAAATATGGAGGAGCCCGAAGATCCTACTAGCAAAGGCTATTATTTTGATGGCTTGTTGCTGCTTGCTAGCACTTTATATGATGGTGGTCAAAAGGCTGAAGCTGCAAAGTATCTGCGTCTTGTTGTTGCATATAATCCTGCTTATAAGAAATTCTTGGAACAATGTGAGCAAGATACTGATTTGACTAGTGATCTTGCCCGTAGTAGGAGAGAACTCTGA 1704 0.4419 MATTAAIRSLLRRSRPSSLLYLPRVLTSHLPPPQPSPFTPHSPSSTILDAFRTRAFSTSSSNDRDFDTDSFSLDSTTHSEILKAVADSASAGGEDIPAFPVRVVISMLDSFHDLTGFPWWLTIVSSTLALRIVLLFPLVFTLHKLKRISEFVPKLPPPFPPPFSGKSYFRQMSFFEEKRKAVGCPSYAWPLVPFMIQVPCFFTWMFSIRRMSLDGHPGFDCGGALWFQNLTEFSHGYSGFTFPFLMAGLHYTIVQVTFKKPLVEGTKDLFDLLSTYYKRYLDFLTLPIAFIGFCIPQGSQIYWITNSTLTLVQHFALRNPATLAKLGLLDKNHQRAASEEIGASKTPHLLRIQDNSTTAATKETVSPEKNPLDSPEKWHKIPTENMSSVELTTLAVPFLNSNDKESAIPLLKLALDKDPEYLRALVLMGRVLLLKQINDEAIVYFERAISKLLLAGHPTDPEEVDFLILSSQWAGIVYARQGKNDEARAYFERVANMEEPEDPTSKGYYFDGLLLLASTLYDGGQKAEAAKYLRLVVAYNPAYKKFLEQCEQDTDLTSDLARSRREL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02405 567 MobiDBLite consensus disorder prediction 356 376 - -
Trre13g02405 567 SUPERFAMILY TPR-like 391 544 IPR011990 GO:0005515
Trre13g02405 567 Gene3D Tetratricopeptide repeat domain 363 566 IPR011990 GO:0005515
Trre13g02405 567 PANTHER OXA1 83 340 IPR001708 GO:0016020|GO:0032977
Trre13g02405 567 CDD 5TM_Oxa1-like 116 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02405 Trre-Chr13 21617765 21626512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02405 - - gmx:100797573 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02405 13 21617765 21626512 Trre13g02405 13 21617765 21626512 ECH