Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02397 ATGGCGTCAGTGCTTGTTTATCATGTGGTTGGAGATCTGACAGTTGGGAAACCAGAGTTGGTTGAGTTTCATGAAACTGAAACGGTTGAATCTGCAATTAGAGCAATAGCTGAATCACCTGAAGGTAGTATACCTATTTGGAAGAAGAGATCTCAAGGTGTGATTGAAAATAGTGATATGAGACAGAATAGGTTTGTTGGTATTCTTAGTTCTTTTGATATTGTTGCTTTTTTGGCTAAGAGTTGGTGTTTGGAGGATCAAGATAAGGCTATGAAGACACCTGTTTCTGAGGTTGTTGTTCCAAATAATTCTTTGCTTAGGTTGGTTGATCCTGGAACAAGGTTGATAGATGCACTGGACATGATGAAGCATGGCGTGAAGCGTCTGCTTGTTCCGAAGAGTATAGTATGGAAGGGCATGAGTAAGCGTTTCTCGGTTGTCTACTACGGCAAGTGGCTCAAGAATCCCGAATCTCCTAGCAGCAGCAGCAACAATCTACATGCAAACGTAAACCGGAACACCTCAGCATCGATCCGTGATAAGTACTGTTGTCTATCCAGAGAAGACGTACTCCGTTTCATCATTGGTTGTCTCGGAGCTCTAGCTCCAATTCCTCTCACTTCCATTGCTGCCCTTGGAGCAATTAATCCACACTACAGCTATATCGAATCCTCCACTCCTGCACTCGAATCAACTCAAAAGGTTCCTCAAGATCCAAGTGCAGTTGCAGTAATAGAAACTACGTCAGACGGCCAGTGTAAGATCATCGGAGAAATTTCAGCAATCAAATTATGGAAATGTGATTACTCATCCGCTGCATGGGCATTAGCGAATCTCTCAGCAGGACAGTTTGTTATGGGAGTTGAAGATAATGATACCTCAAGGTCCCTTCCTGATTTCTGTGTCAATGCAAGATCCGGAGGAGATAATGATCTTGTTAACGGTGGCGGCGGTTCTAGAAAACCAAAGAAATTCAGTAGCAGGAGTATTGGATTCTTCAATAACTCAGCAAGCCATAGTTTCGGTTCGAGGAGCATGTATCGAGGTAGAAGTGCACCGTTGACGTGTAAAGTGACTAGTTCATTAGCTGCAGTGATGGCTCAGATGCTATCTCATAGGGCAACTCATGTTTGGGTGACTGAAGATGAGAATGAAGAAGTTTTGGTTGGTGTTGTAGGATATGCTGATATACTAGGTGCTGTAACCAAACCACCTACAATCTTCACTCCTCCTATTAGATCTTCAGAAGGATTTGGAAATGAAATTCAGTGTTGA 1275 0.429 MASVLVYHVVGDLTVGKPELVEFHETETVESAIRAIAESPEGSIPIWKKRSQGVIENSDMRQNRFVGILSSFDIVAFLAKSWCLEDQDKAMKTPVSEVVVPNNSLLRLVDPGTRLIDALDMMKHGVKRLLVPKSIVWKGMSKRFSVVYYGKWLKNPESPSSSSNNLHANVNRNTSASIRDKYCCLSREDVLRFIIGCLGALAPIPLTSIAALGAINPHYSYIESSTPALESTQKVPQDPSAVAVIETTSDGQCKIIGEISAIKLWKCDYSSAAWALANLSAGQFVMGVEDNDTSRSLPDFCVNARSGGDNDLVNGGGGSRKPKKFSSRSIGFFNNSASHSFGSRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATHVWVTEDENEEVLVGVVGYADILGAVTKPPTIFTPPIRSSEGFGNEIQC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02397 424 Gene3D - 8 136 IPR046342 -
Trre13g02397 424 CDD CBS_pair_SF 23 131 - -
Trre13g02397 424 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 403 - -
Trre13g02397 424 SMART cbs_1 352 402 IPR000644 -
Trre13g02397 424 SMART cbs_1 19 79 IPR000644 -
Trre13g02397 424 Pfam CBS domain 352 401 IPR000644 -
Trre13g02397 424 Gene3D - 329 403 IPR046342 -
Trre13g02397 424 SUPERFAMILY CBS-domain pair 352 401 IPR046342 -
Trre13g02397 424 ProSiteProfiles CBS domain profile. 346 407 IPR000644 -
Trre13g02397 424 SUPERFAMILY CBS-domain pair 7 131 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02397 Trre-Chr13 21576606 21579422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02397 - - gmx:100788752 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02397 13 21576606 21579422 Trre13g02397 13 21576606 21579422 ECH