Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02387 ATGAGACAAAGAATGGAAAGGCTTGTTATTCTTCCTTTCTCTGCTGGTTGTATTTCTCAGGCTAGCGTTGCTGTTGGTGTTCCACAACAAAGAAGATCAAAACCTGTAGACATCAATTCACCACATGATGCTGCAATAAGATCTAAAGGAGTCGAGGATGCAGATAATCTGTCTGGTGAAAGTATGAAGAATTCTTTGAGACTCCTTGATGTTGTTCCAAAGCCTAACCTGTCATTCAACAAGTTGTTCAAAGGCTTCAAGAACTTTTCTCTATTGTTTGGGGAAAAAGAAGAGGAATCAGAAGAAGTAGAAATGGACATGGAAATAGGGTGCCCAACAGATGTGCAACATGTGACACACATTGGTTGGGATGGTGTTACAAGCTGTACGGCTGCTGACCCAATGAGGGGATGGGATGCTCTCATTCCTCCTGAGCTCCTCTCTCTTGCAGCCTCTCAATCTTTACAGCCAAAAAAACATGAAACATCATCTCCCATCATGCCTTCTATTGCATAA 516 0.4225 MRQRMERLVILPFSAGCISQASVAVGVPQQRRSKPVDINSPHDAAIRSKGVEDADNLSGESMKNSLRLLDVVPKPNLSFNKLFKGFKNFSLLFGEKEEESEEVEMDMEIGCPTDVQHVTHIGWDGVTSCTAADPMRGWDALIPPELLSLAASQSLQPKKHETSSPIMPSIA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02387 171 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 160 IPR044509 -
Trre13g02387 171 Pfam P21-Rho-binding domain 108 127 IPR000095 -
Trre13g02387 171 ProSiteProfiles CRIB domain profile. 109 122 IPR000095 -
Trre13g02387 171 CDD CRIB 109 126 - -
Trre13g02387 171 Gene3D CRIB domain 105 162 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02387 Trre-Chr13 21490657 21492835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02387 - - gmx:100787187 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02387 13 21490657 21492835 Trre13g02387 13 21490657 21492835 ECH