Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02352 ATGCCAACACCAATGGCTCTAAATCTCTGCACCTCCCCTAAATGGATTGGCACCACCGTTTTCGATAGTGGTTCTTCATCGAAGCTATTACTTGGTTCATCTTCTTCTTCTACAACTTCATTTTCCATTTTGAGTTCTAAGAGTGTTGGTTTGAAGAGCTTAAGCTTGAGGAAAAGTGGGAGTGTGAGTGTAAGATCTAGTTTGGAAACTACGGGGCCCACTGTGACGGTTGGGCAAGTTACTGAAGTTAACAAGGATACGTTTTGGCCCATCGTTAATGCCGCCGGTGATAAAACCGTCGTCCTCGACATGTACACCCAATGGTGCGGTCCTTGCAAAGTGATAGGTCCAAAATACAAAGAATTATCTGAGAAGTATTTGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGATAACAAGCCTTTGGCAAAAGAGCTAGGAATTAAGGTGGTTCCCACTTTTAAAATTCTTAAGGACAACAAGGTTGTAAAAGAAGTAACTGGAGCTAAATATGATGATTTGGTCGCTGCCATTGATGCTGTTCGGTCTAGCTAA 558 0.4211 MPTPMALNLCTSPKWIGTTVFDSGSSSKLLLGSSSSSTTSFSILSSKSVGLKSLSLRKSGSVSVRSSLETTGPTVTVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVIGPKYKELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLVAAIDAVRSS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02352 185 PRINTS Thioredoxin family signature 100 108 - -
Trre13g02352 185 PRINTS Thioredoxin family signature 148 159 - -
Trre13g02352 185 PRINTS Thioredoxin family signature 108 117 - -
Trre13g02352 185 PANTHER THIOREDOXIN-LIKE PROTEIN 1 79 180 - -
Trre13g02352 185 ProSiteProfiles Thioredoxin domain profile. 66 184 IPR013766 -
Trre13g02352 185 SUPERFAMILY Thioredoxin-like 74 182 IPR036249 -
Trre13g02352 185 CDD TRX_family 86 180 - -
Trre13g02352 185 Pfam Thioredoxin 80 180 IPR013766 -
Trre13g02352 185 Gene3D Glutaredoxin 64 184 - -
Trre13g02352 185 ProSitePatterns Thioredoxin family active site. 101 119 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02352 Trre-Chr13 21269058 21272787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02352 K03671 - gmx:100306555 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02352 13 21269058 21272787 Trre13g02352 13 21269058 21272787 ECH