Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02349 ATGGCTATGGTTATGGGTAGTGAGGTTTCAATCTCTTTTCTTCTTCTTATTGTAACCCTTTCATGGTTATGTACCTTTGTAAAGGGTGGTTCAAATTCAACAACAATATACGATGAATTAAGGGCAAAGGGTCTTCCAGAAGGGCTTCTACCAAAAGGAATAACGAGGTATGAAATCAACAGTAGCAGTGGTGAATTTCAGGTTTGGATGGAAGAACCTTGTAATGCAAAGTTTGAAAATGAGGTTCACTATGATCCAAATATTAAGGGTACCCTTGGTTATGGTCAGATCGGGGAATTATCTGGTATGACTGCTCAAGAACTCTTTCTATGGTTCCCTGTTAAAGGCATTCATGTTGATCTACCTAGCTCTGGTCTCATTCACTTCGATGTTGGTGTTGCTGATAAACAATTCTCTTTGTCTCTCTTTGAAGATCCTCCTGTTTGTAACCCTCAGGTTTATGCTATTAACGATGATGTGCTGAGAGCCGTTTGGTGA 498 0.3976 MAMVMGSEVSISFLLLIVTLSWLCTFVKGGSNSTTIYDELRAKGLPEGLLPKGITRYEINSSSGEFQVWMEEPCNAKFENEVHYDPNIKGTLGYGQIGELSGMTAQELFLWFPVKGIHVDLPSSGLIHFDVGVADKQFSLSLFEDPPVCNPQVYAINDDVLRAVW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02349 165 Pfam Protein of unknown function, DUF538 37 144 IPR007493 -
Trre13g02349 165 FunFam Uncharacterized protein At3g07460 25 153 - -
Trre13g02349 165 PANTHER T31J12.3 PROTEIN-RELATED 28 149 IPR007493 -
Trre13g02349 165 SUPERFAMILY At5g01610-like 11 150 IPR036758 -
Trre13g02349 165 Gene3D - 19 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02349 Trre-Chr13 21237552 21239355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02349 - - gmx:100778787 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02349 13 21237552 21239355 Trre13g02349 13 21237552 21239355 ECH