Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02346 ATGGATGCAATACGGAAGCAGCTCGACGTTCTCATGGGTGCCAATCGTAACGGCGACGTCCGTGAAGTTAACCGCAAGTATTACGATCGCGACGTCTGTCGTCTTTACCTCGTCGGTCTTTGCCCTCACGAACTCTTTCAGTTAACGAAAATGGATATGGGACCTTGCCCTAAGGTTCACTCATTGCAGCTTAGAAAAGAATATGAGGAAGCGAAATCAAAAGGGATTGATAATTACGAGAGGGAGTTGGAGGATGTTATAGATAAGCTTATTGGTGAATGTGATAGGAAAATTGGTAGAGCGCTTAAGCGGCTTGAGGATGATGATGCCAAAGCCGCAATTGCAATTTCGGTTTCTGAAGTTACTCAGACACCTGAAGTGTTTGAATTGTCTAAAGAAATCAAACAGAAGTTGAAAGAAGCTGATAAATATGATCTTGAAGGCTTGTCAGATATGAGGATTCGAGCTTTGGAGATTGTAGAGGAACTTAGAATCAAAAGAGCAGACAAACAGTCTACGCTTCTTTTAGATGCATTCAACAAAGATAGGGCATCTTTACCTCAACCGCTGCCAAATCCACCACCGTTAGCACCCCTTCCCGTCGTTACTCCCGATGCTCGAACACAGGAGATGATAAATGAAAAGTTGAAGAAGGCTGAGGATCTTGGTGAGCAAGGATTGATTGATGAGGCACAGAAAGCATTGGAAGAGGCTGAAGCACTTAAGAAGCTTCCTTCCAGGCAGGAGCCAGCACTGGATTCTTCAAAGTATACAGCTGCTGATGTTCGGATTACTGATCAGAAGCTACGTGTGTGCGATATTTGTGGAGCATTTTTGAGTGTTTATGACAGTGATCGTCGATTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAAATTCGTGAGAAGTTGGCAGAACTTCAAGAAGAAAGGAACAAGAGGTTCCAGGTTGAACGTCTTGATGACAGGAGATCAAAAGAACGGAGTAGGGATCGTGACAGGGAGCCAAGTAGAGACCGTGAACGTGGTGGGAGCCATGAACGAGGGCGAGACATTGATCGTAGGAGCAGAGATCGTGACAGGCACCATGATAGAGACCGTGGATATGATCGAGATCGGGACAGAGACTCATCCCGCTCATACGATTCAAGAAGTCGTCGGAGGTCACGATCTCGAGAGCATTCTAGAGATTATGATCGTCATAGGCGCCATGATCGGTACTAG 1233 0.4534 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKSKGIDNYERELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVFELSKEIKQKLKEADKYDLEGLSDMRIRALEIVEELRIKRADKQSTLLLDAFNKDRASLPQPLPNPPPLAPLPVVTPDARTQEMINEKLKKAEDLGEQGLIDEAQKALEEAEALKKLPSRQEPALDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKRFQVERLDDRRSKERSRDRDREPSRDRERGGSHERGRDIDRRSRDRDRHHDRDRGYDRDRDRDSSRSYDSRSRRRSRSREHSRDYDRHRRHDRY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02346 410 MobiDBLite consensus disorder prediction 321 410 - -
Trre13g02346 410 Pfam LUC7 N_terminus 208 326 IPR004882 GO:0003729|GO:0005685|GO:0006376
Trre13g02346 410 Pfam LUC7 N_terminus 2 172 IPR004882 GO:0003729|GO:0005685|GO:0006376
Trre13g02346 410 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 406 IPR004882 GO:0003729|GO:0005685|GO:0006376
Trre13g02346 410 Coils Coil 224 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02346 Trre-Chr13 21213377 21218033 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02346 - - gmx:100793888 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02346 13 21213377 21218033 Trre13g02346 13 21213377 21218033 ECH