Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02336 ATGGGTTTGTGTCCGTGTTTTGGCCACGATGAAGGATCCGAAAACCCACCTTCTGATCGTGACCCGGTTCTACTTGTTTCGGGTATGGGTGGCTCCATTCTCCACTCCAAACCCAAGAAATTCGGTTTAACCACTCGTGTTTGGGTCAGAATCTTCCTTGCTGACTTAGAATTTCGAAAGAAGATTTGGTCACTTTACAATCCCCAAACAGGTTACACTGAATCGTTAGACAAGAAATCTGATATTGTTGTTCCTGATGATGATCACGGTCTCTATGCAATTGATATTTTAGATCCATCATGGTTTGTAAAATGTGTGCATTTGACAGACGTGTATCATTTTCATGACATGATTGACATGCTCGTTGGATGTGGGTACGTCAAAGGTACCACTTTGTTTGGATACGGATATGATTTCCGACAAAGCAATAGAATGGACAAGTTAATGGATGGCCTTAAACTCAAGTTGGAAACTGCTTACAAAGCCTCTGGTGGAAGAAAAGTCAATATAATTTCACACTCCATGGGAGGGGTTTTGATCTTGTGTTTCATGTCACTTCACAGAGATGTGTTTTCTAAATATGTGAATAAGTGGATTGCCTTGGCTTGCCCTTTCCAAGGAGCTCCAGGGTGCATCAATGATACTCTATTAACTGGATTGGAATTTGTTGAGGGCTTAAAAAGCTTTTTTTTTGTGTCAAGGTGGAGTTTTCATCAATTGCTAGTTGAATGTCCATCAATCTATGAGATGTTGGCAAATCCGGATTATGAATGGAAAAAGCACCCAGAAATTAAAGTTTGGAGAAAGCATAATAAGGATGGGAATGTTAACATCAATTTGGAATCTTATGGACCAACCCAGAGTATCTCTGTATTTGAAGAAGCACTGAGGAACAATGAGCTAAAGTATAATGGGAAATTAATATCACTTCCCTTTAATTTAGCTATCTTCAAATGGGCTACTGGAACTCGTCAAGTTATAAGTAATTCTAAACTACCGGATGGGGTCAGCTTCTATAACATTTACGGAACATCATTTGACACACCTTTCGATGTTTGCTATGGTTCGGAAAAATATCCAATAGATGACTTATCTGAAATATGCCAGACTTTGCCACAATATTCTTATGTTGATGGAGATGGGTCAGTTCCTGTTGAATCAGCCAAGGCTGATGGACTCAACGCCATTGAAAGGGTAGGAGTTGCTGCTGAGCACCGTGGATTATTAAGAGATAAAACTGTATTTCAACTTATTCAAAAGTGGTTGGGTGTTGAGCCAATGGTTAGCAAGCAATCTATGACATCAAAAGTGGCAGATGGGAATGCAATCAACCCTATGGTTCTGTAA 1347 0.3972 MGLCPCFGHDEGSENPPSDRDPVLLVSGMGGSILHSKPKKFGLTTRVWVRIFLADLEFRKKIWSLYNPQTGYTESLDKKSDIVVPDDDHGLYAIDILDPSWFVKCVHLTDVYHFHDMIDMLVGCGYVKGTTLFGYGYDFRQSNRMDKLMDGLKLKLETAYKASGGRKVNIISHSMGGVLILCFMSLHRDVFSKYVNKWIALACPFQGAPGCINDTLLTGLEFVEGLKSFFFVSRWSFHQLLVECPSIYEMLANPDYEWKKHPEIKVWRKHNKDGNVNINLESYGPTQSISVFEEALRNNELKYNGKLISLPFNLAIFKWATGTRQVISNSKLPDGVSFYNIYGTSFDTPFDVCYGSEKYPIDDLSEICQTLPQYSYVDGDGSVPVESAKADGLNAIERVGVAAEHRGLLRDKTVFQLIQKWLGVEPMVSKQSMTSKVADGNAINPMVL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02336 448 Pfam Lecithin:cholesterol acyltransferase 86 388 IPR003386 GO:0006629|GO:0008374
Trre13g02336 448 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 18 433 - -
Trre13g02336 448 SUPERFAMILY alpha/beta-Hydrolases 17 411 IPR029058 -
Trre13g02336 448 Gene3D alpha/beta hydrolase 78 423 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02336 Trre-Chr13 21151009 21159868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02336 4 439 Acyl Lipid Metabolism Gene Families AT3G03310 68.182 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02336 K22389 - gmx:100797043 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02336 13 21151009 21159868 Trre13g02336 13 21151009 21159868 ECH