Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02089 ATGGCTCTCAAAGCCGTCCACGTCTCCGATGTCCCTTCCCTCGATCTCGTCCCTGAATCTCCTCTTCTCTCCTCCCGTTTCCCAAACGGTTTGGAGATGAGTAATGGTGGATTCAAGGTGCCAAAGTTCGTTGTTATTGGACATAGAGGAAACGGTATGAATGTATTGCAATCTACAGATCGGAGAATGAGAGCCATCAAAGAAAACTCAATCATGTCTTTCAACGCTGCTTCTTCTTTTCCTCTTGATTTCATTGAATTTGATGTTCAGGTGACCAAAGATGACTGCCCAGTCATTTTCCATGATGATTACATTTACTCTCAAGAAAATGGTAATGTATTTGGAAAGAAAATACCTGAGTTGTGTTTATCTGAGTTTCTTTCCTATGGGCTACAAAGAGAGCCTGGAATGGAAGGAAAAATGTTGGTTAGAAAAACAAAAGATGGAAAGATATATAATTGGGAAGTTGAACAAGATGACACACTTTGTACCCTTCAAGAAGCATTTCTCAAAGTTGAACCTTCTTTGGGTTTTAACATTGAGTTGAAATTTGATGACCATATTGTTTATGAACAAGCTTATCTTATTCATGTCCTTCAAGCCATCTTAAAGATTGTTACTGATTACGCTAAGGATCGGCCTATAATATTTTCAACTTTTCAACCTGATGCTGCAGTACTTGTCCGTAAATTGCAAAGCACCTACCCCGTTTTCTTTTTAACTAATGGAGGGTGTGAAATCTATGAAGATTTGAGAAGAAATTCCTTGGAGGAGGCCTTAAAACTCTGTTTGGAGAATGGATTGGAAGGAATTGTTTCTGAGATTAAAGGGATATTTAGAAATCCTGGAGCAGTAAGCAAGATCAAGGAGTCCAATCTTTCTCTTCTAACATATGGCAAATTAAATAATGTTCCAGAAGCTGTTTACATGCAGCACTTAATGGGAATTGATGGGGTAATAGTAGATTTTGTGCAAGAAATAACAGAGGCTGTTGCAGATATGGTGAAACCAACAAAAAATATTGGTGAGGAAGAGGGTTTGACTGAAGAAGGGGTTGAGAAGGTGGAAGTGAACAAATCAAAGCCTCAATTTTCACAATTGGAGCTTTCTTTTCTTTACAAGCTTATTCCACAATTGCTTTTGCTTTAA 1149 0.3812 MALKAVHVSDVPSLDLVPESPLLSSRFPNGLEMSNGGFKVPKFVVIGHRGNGMNVLQSTDRRMRAIKENSIMSFNAASSFPLDFIEFDVQVTKDDCPVIFHDDYIYSQENGNVFGKKIPELCLSEFLSYGLQREPGMEGKMLVRKTKDGKIYNWEVEQDDTLCTLQEAFLKVEPSLGFNIELKFDDHIVYEQAYLIHVLQAILKIVTDYAKDRPIIFSTFQPDAAVLVRKLQSTYPVFFLTNGGCEIYEDLRRNSLEEALKLCLENGLEGIVSEIKGIFRNPGAVSKIKESNLSLLTYGKLNNVPEAVYMQHLMGIDGVIVDFVQEITEAVADMVKPTKNIGEEEGLTEEGVEKVEVNKSKPQFSQLELSFLYKLIPQLLLL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02089 382 Gene3D Phosphatidylinositol (PI) phosphodiesterase 36 333 IPR017946 GO:0006629|GO:0008081
Trre13g02089 382 ProSiteProfiles GP-PDE domain profile. 43 331 IPR030395 GO:0006629|GO:0008081
Trre13g02089 382 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 35 336 - -
Trre13g02089 382 FunFam Glycerophosphodiester phosphodiesterase GDPD2 34 333 - -
Trre13g02089 382 SUPERFAMILY PLC-like phosphodiesterases 41 325 IPR017946 GO:0006629|GO:0008081
Trre13g02089 382 Pfam Glycerophosphoryl diester phosphodiesterase family 48 325 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02089 Trre-Chr13 18250099 18252322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02089 K18696 - gmx:100807698 600.897