Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02082 ATGGCGGATCCAATCTCCAAACCTCTGATTGCATTCCTCCTCATAGCTTCCTTCTTACTCTGCTCTCACGCTTCCTCTGACGTCCCCTTCATCGTCGCTCACAAGAAAGCTTCTCTCAACAGACTCAAGTCTGGCGCTGAAAGAGTCTCTGTCACCATCGATATCTACAACCAAGGAATCTCGACGGCATATGATGTGAGTCTGGCAGATGAGAGTTGGCCAGCTGACCTTTTCAGTATAATCAGTGGTACCACTTCAAAGACATGGGAAAAGCTTGATGCTGGTGGCATCCTCTCTCACACATTTGAGCTGGAGGCAAAATCAAAGGGAGTATTTTCCGGTGAACCTGCTGTCATCAAGTTCCGTGTCCCCACAAACGCCGCTTTACAGGAGGCATTTTCAACTCCCATATTGCCATTAGATGTTCTTGCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTAATCTCGGTGATCAGCATTATCGTTATGTTTGTGTACCTGGTAGCTTCACCATCAAAATCTGGTGCAAAAGGAAGCAAGAAGAAGCGTTAA 585 0.465 MADPISKPLIAFLLIASFLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGISTAYDVSLADESWPADLFSIISGTTSKTWEKLDAGGILSHTFELEAKSKGVFSGEPAVIKFRVPTNAALQEAFSTPILPLDVLADRPPEKKFEWAKRLLAKYGSLISVISIIVMFVYLVASPSKSGAKGSKKKR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02082 194 Pfam Translocon-associated protein beta (TRAPB) 15 191 - -
Trre13g02082 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 10 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02082 Trre-Chr13 18165701 18168109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02082 K13250 - gmx:100500066 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02082 13 18165701 18168109 Trre13g02082 13 18165701 18168109 ECH